Streptomyces inhibens: KI385_27185
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Entry
KI385_27185 CDS
T08140
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sine
Streptomyces inhibens
Pathway
sine03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KI385_27185
09124 Replication and repair
03420 Nucleotide excision repair
KI385_27185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sine03021
]
KI385_27185
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_27185
Enzymes [BR:
sine01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI385_27185
Transcription machinery [BR:
sine03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KI385_27185
DNA repair and recombination proteins [BR:
sine03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KI385_27185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UKY52135
LinkDB
All DBs
Position
complement(5933357..5935009)
Genome browser
AA seq
550 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHELADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQFSRYPVPHALLVDVAETMSRYGRLTLTKHPAHGLVLTSTDRPVLEEILR
SKKVQPLVGARLDPDSVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELREDGWA
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAQATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRYCATTASKQFVTEALVRRHQGEQTLVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFGAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLAADEDV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacccctcatcgtccagagcgacaagacgctgcttctggaggtggaccacgag
ctggcggacgcctgccggcgagccatcgcgccctttgccgagctggagcgggcgccggag
cacatccatacgtaccgggtgacgccgctgggcctgtggaacgcgcgggcggccgggcac
gacgccgagcaggtcgtggacgcgctggtgcagttctcgcggtatccggtgccgcatgcg
ctgctcgtcgatgtcgcggagacgatgtcgcggtacgggcggctcacgctcaccaagcac
cccgcgcacgggctggtgctgaccagcaccgaccgcccggtgctggaggagatcctgcgg
tcgaagaaggtgcagccgctggtcggggcgcggctggatcccgacagcgtcgtcgtccac
ccctccgagcgcgggcagatcaagcagacgctgctcaagctgggctggccggccgaggac
ctggccggttacgtcgacggtgaggcgcatccgatcgagctgcgcgaggacggctgggcg
ctgcggccgtatcagcagcaggccgtggagggcttctggcacggcggctcgggtgtggtc
gtactgccgtgtggtgcgggaaagacgctggtcggggccggtgcgatggctcaggcgcag
gccaccacgctgatcctcgtcacgaatacggtctcggcccggcagtggaagcacgagttg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcgggacgaagaaggag
atccgcccggtcaccatcgcgacgtatcaggtgctgaccacgaagcggaagggtgtctac
ccgcatctggagctgttcgactcccgggactggggtctgatcgtctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcaccgccgatctgcaggcacggcggcggctgggg
ctgaccgcgacgctggtgcgggaggacggccgggagtcggatgtcttctccctcatcggg
cccaagcggttcgacgcgccgtggaaggagatcgaggcgcaggggtacatcgcgcccgcg
gactgtgtcgaggtgcgggtcaatctgaccgactcggagcggctggcgtacgcgacggcc
gagaccgaggagaagtaccgctactgcgcgaccaccgccagcaagcagttcgtgaccgag
gcgctggtccgtcggcaccagggcgagcagaccctggtcatcgggcagtacatcgaccag
ctggacgagctgggcgagcatctgaacgcgccggtgatcaagggcgagacctccaacgcc
cagcgggagaagctcttcggcgcgttccgggagggcgagatctcggtgctcgtcgtctcg
aaggtggcgaacttctcgatcgatctgccggaggcgacggtcgcgatccaggtgtccggc
accttcggctcgcgccaggaggaggcccagcggctgggccgggtgctgcgtcccaaggcg
gacggccacgaggcgcggttctattcggtcgtcgcccgcgacaccatcgaccaggacttc
gccgcacaccgtcagcgcttcctggccgagcagggctacgcgtaccggatcgtggacgcg
gacgagctgctggcggcggacgaggacgtctga
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