Streptomyces inhibens: KI385_29630
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Entry
KI385_29630 CDS
T08140
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sine
Streptomyces inhibens
Pathway
sine03420
Nucleotide excision repair
sine03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KI385_29630
03430 Mismatch repair
KI385_29630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sine03400
]
KI385_29630
Enzymes [BR:
sine01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KI385_29630
DNA repair and recombination proteins [BR:
sine03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KI385_29630
MMR (mismatch excision repair)
Other MMR factors
KI385_29630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UKY52557
LinkDB
All DBs
Position
6502378..6506031
Genome browser
AA seq
1217 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTECITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELSERVRAALLAAGVTDPDALPPAGHGPDTDQPPGEPRISTYH
AFAGQLLKDHGLRIGLEPSARLLADATRFQLAARTLRAAPGPYPALTTSLPSLVEDLLAL
DAELAEHLVDPARLRTYDNELLAALDGVKLTNADLRKVPETARGRLELLDLVTAYRSEKR
RRDLLDFGDQIAHSATLATTRPDVGRILRDEFRVVLLDEYQDTSVAQRLLLSGLFGAGTG
AAAGHAVTAVGDPCQAIYGWRGASVANLDDFPAHFPFADGTPARRYALSENRRSGGRLLD
LANGLAAPLRRMHEGVEALRPAPGAERDGTVRCALLPTHAEELTWLADSLAHLVRTGTPP
GEIAVLCRTAGDFARIQGELVARDIPVEVVGLSGLLHLPEIADLVAVCEVLQDPTANASL
VRLLIGPRWRIGPRDLALLGRRARTLVHHSSPSDDPGQRLAEAVEGVDPAETISLADALD
TFLEAEGPDDGLPFSAEARIRFAYLATELRDLRRSLGDPLMDVLHRVLAATGLEVELSAS
PHALAARRRETLGTFLDIAAGFAAKQGGESLDGEATLLAFLGFLRTAVQYEKGLDSSLPG
GDNTVKVLTAHKSKGLEWDVVAVPGLVGKQFPSEQARESWISRPKVLPHALRGDAATLPD
IEKWDARGLKSFKEAMKHHQETEELRLGYVTFTRPRSLLLGSGHWWGPNQKRPRGPSAFL
DALREHCEAGHGEIEAWAEPPEDGAENPALAEAATEQAWPLPLDPTATARRRAAAATVRA
HLARRQGAADPAPATAPAPLFAHDPEWPPPPADEEWAGDPYDEWDGDPYDIPEAGPFDDT
PPDAAPPYDALAEADPFDEAPPHATTPDAGPTPAARPRIIAQRSAEPDLTGPEFTGFPGP
DTAHPTDPGDTTPHALLPEERRIVGSWDRDLDALAAELRRSRATVRDVPLPAALSATQLL
RLAADPDGFARELARPMPRPPQPGARRGTRFHAWVESRFEELTLPFLGPDELPGADPGDE
TGIADEHDLETLKEAFARTPYAHRTPHRIEAPFQLTLAGRVIRGRIDAVYKERGPDGDRF
EIVDWKTGRAHTADPLQLAVYRLAWAERHGLPPSAVDAAFLYVRTGEVVRPTRLPGRAGL
ERILLGETADRPPPEGR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagcccgcatcaccgaccccgagcagctcaaagagctcctcggtatcccgttcaca
ccggagcagacggagtgcatcaccgccccgcccgccccgcaggtcatcgtggccggagcc
ggctcgggcaagaccacggtcatggccgcccgcgtcgtgtggctggtcggcaccggccag
gtcgcccccgaacaggtcctcggactgaccttcaccaacaaggcagccggcgaactctcc
gaacgcgtcagagccgccctcctcgccgccggcgtcaccgaccccgacgcgctcccaccc
gccggccacggccccgacaccgaccagccccccggcgagccacggatctccacctaccac
gccttcgccgggcagctcctcaaggaccacggcctgcgcatcggcctggaacccagcgcc
cggctgctcgccgacgccacccgcttccagctcgccgcccggaccctgcgcgccgccccc
ggcccctacccggcgctcaccacctccctgccctccctcgtggaggacctcctcgccctc
gacgccgaactcgccgaacacctcgtggaccccgcccggctccgcacgtacgacaacgaa
ctcctcgccgccctcgacggcgtgaaactcaccaacgccgacctgcgcaaggtccccgaa
accgcccgcggccgcctcgaactgctcgacctcgtcaccgcctaccgcagcgaaaaacgc
cgccgcgacctcctcgacttcggcgaccagatcgcccactccgcgaccctcgccaccacc
cgccccgacgtcggccgcatcctgcgcgacgaattccgcgtcgtcctcctcgacgaatac
caggacacctccgtcgcccaacggctgctgctgtccggcctcttcggcgccggcaccgga
gccgccgccgggcatgccgtcaccgccgtcggcgacccctgccaggccatctacggctgg
cgcggtgcctccgtcgccaacctcgacgacttccccgcccacttccccttcgccgacggc
acccccgcccgccgctacgccctcagcgagaaccgccgcagcggcggccgcctcctcgac
ctcgccaacggcctcgccgcccccctccgccggatgcacgagggcgtcgaagccctacgc
cccgcccccggcgccgagcgcgacggcacggtccgctgcgccctgctgcccacccacgcc
gaagagctcacctggctcgccgactccctcgcccacctcgtccgcaccggcaccccaccc
ggcgagatcgcggtgctctgccgcaccgccggcgacttcgcccgcatccagggcgaactc
gtcgcccgggacatccccgtcgaggtcgtcggcctctccggcctgctgcatctgcccgag
atcgccgacctcgtcgccgtctgcgaagtcctccaggaccccaccgccaacgcctccctg
gtccgcctgctgatcggcccgcgctggcggatcggcccccgcgacctggccctcctcggc
cgccgcgcccgcaccctcgtccaccacagcagcccgtccgacgaccccggacaacgcctc
gcggaagccgtcgaaggcgtcgacccggccgaaaccatctccctcgccgacgccctcgac
accttcctggaagccgaaggacccgacgacggcctgccgttctccgccgaggcacggatc
cgcttcgcctacctcgccaccgagctgcgcgacctgcggcgctccctcggcgaccccctc
atggacgtcctccaccgggtgctcgccgccaccggcctggaggtcgagctgtccgcctca
ccccacgccctcgccgcccgccgccgcgagaccctcggcaccttcctcgacatcgccgcc
ggcttcgccgccaaacagggcggcgaatccctcgacggcgaagccaccctcctcgccttc
ctcggcttcctgcgcaccgccgtccagtacgaaaagggcctcgacagctcccttcccggc
ggcgacaacaccgtcaaggtgctcaccgcccataaatccaagggcctggaatgggacgtc
gtcgccgtacccggcctggtcggcaagcaattccccagcgaacaggcccgcgagtcctgg
atcagccgccccaaggtcctgccgcacgccctgcgcggcgacgccgccaccctccccgac
atcgagaagtgggacgcccgcggcctcaagtccttcaaggaggcgatgaagcaccaccag
gaaaccgaggaactccgcctcggctatgtcaccttcacccgcccgcgctccctgctcctc
ggctccggccactggtggggccccaaccagaagcgaccccgcggcccctccgccttcctc
gacgcactccgcgagcactgcgaagccggacacggcgagatcgaagcctgggccgagccc
cccgaggacggcgccgagaacccggccctcgccgaagccgccaccgaacaggcctggccg
ctgcccctcgaccccacggccaccgcccgccgccgcgccgccgcggccaccgtccgcgcc
catctggcgcgccgacagggcgccgccgaccccgctcccgccacggcccccgcgccgctg
ttcgcgcacgacccggaatggccgccgcccccggcggacgaggagtgggcgggcgacccg
tacgacgagtgggacggcgatccgtacgacatcccggaagccggcccgttcgacgacacc
ccgccggacgccgcaccgccctacgacgccctcgccgaagccgaccccttcgacgaggct
ccgccgcacgccaccacccccgacgccgggcccaccccggccgcccggccccgcatcatc
gcccaacgctcggccgagcccgacctcaccggacccgagttcaccggattccccggcccc
gacaccgcccaccccaccgaccccggcgacaccaccccacacgccctcctccccgaggag
cgccgcatcgtcggatcctgggaccgcgatctggacgccctcgccgccgagctgcgccgc
tcccgcgccaccgtccgcgacgtccccctccccgccgcgctcagcgccacccagctcctc
cgcctcgccgccgaccccgacggcttcgcccgcgaactggcccgccccatgccgcgcccg
ccccagcccggcgcccgccgtggcacccgcttccacgcctgggtcgaatcccgcttcgaa
gaactgaccctgccgttcctcggccccgacgaactacccggcgccgacccgggcgacgaa
accggcatcgccgacgaacacgacctcgaaaccctcaaggaagccttcgcccgcaccccc
tacgcccaccgcaccccccaccgcatcgaggcccccttccagctgacactcgccggacga
gtgatccgcggccgcatcgacgccgtctacaaggagcgcggccccgacggcgaccgcttc
gagatcgtcgactggaagaccggccgggcccacaccgccgaccccctccagctggccgtc
taccgcctcgcctgggccgagcgccacggcctgccgccgtccgccgtcgacgccgccttc
ctctacgtccgcaccggcgaagtcgtcagacccacacgactgcccggccgggccggactc
gaacgcatcctcctcggcgagaccgccgaccggcctcccccggaaggccgatag
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