Streptomyces inhibens: KI385_29950
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Entry
KI385_29950 CDS
T08140
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sine03021
]
KI385_29950
Transcription machinery [BR:
sine03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KI385_29950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
DUF7343
HTH_23
MarR_2
Sigma70_ECF
HTH_24
MarR
NirdL-like_HTH
HTH_Crp_2
HTH_3
IF2_N
DinB_2
HTH_ParB
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
UKY55409
LinkDB
All DBs
Position
complement(6573409..6574368)
Genome browser
AA seq
319 aa
AA seq
DB search
MASSATIPEQQARPHPVGVDDHGGRLDAAEQVERADQMDQSEQQGQQAQQHDAPEPEHKL
QDQQHSQEPQDRSGARAMFYELRKLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRGEP
LDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELR
LSLTTATAELSQRHGRAPTVHELAEHLAISEEEVLEGLESANAYSTLSLDVPDTDDESPA
VADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHV
SRLLARTLAQLRDKLLVEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtgcgaccatccccgagcagcaggcccggccgcatccggtgggcgtagat
gaccacggcggccggttggatgcggcggagcaggtagagcgggcggaccagatggaccag
agcgagcagcaggggcagcaggcgcagcagcacgatgcgccggagcccgagcacaagctg
caggatcaacagcattcccaggagccgcaggaccgcagcggcgcccgggcgatgttctat
gagctgcgcaagctgcccgacggctccccggagcgcgcggagctgcgcaacaccctcgtc
cgcatgcacctgccgctcgtcgagcatctggcccgccggttccgcaaccgcggcgagccg
ttggacgacctcacccaggtcgccaccatcggcctgatcaagtcggtggaccgcttcgac
ccggagcgcggcgtggagttctccacgtacgccacccccaccgtcgtcggcgagatcaag
cggcacttccgcgacaagggctgggcggtccgcgtcccgcgtcgcctccaggagctgcgg
ctgtcgctgaccacggcgaccgccgagctctcccagcggcacggccgcgcccccaccgtc
catgagctggccgagcatctggcgatctccgaggaggaggtcctggagggcctggagtcc
gccaacgcctacagcacgctctccctggacgtccccgacacggacgacgagtcgccggcc
gtcgccgacaccctcggcgccgaggacgaggccctggagggcgtggagtaccgcgagtcc
ctcaagccgctgctggaggatctcccgccgcgcgagaagaagatcctgctgctgcgcttc
ttcggcaacatgacccagtcgcagatcgcccaggaggtcggcatctcccagatgcatgtc
tcgcgcctgctggcccgcaccctcgcccagctgcgcgacaagctgctcgtcgaggagtga
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