KEGG   Streptomyces inhibens: KI385_31560
Entry
KI385_31560       CDS       T08140                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sine  Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:sine00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sine03032]
    KI385_31560
   03036 Chromosome and associated proteins [BR:sine03036]
    KI385_31560
   03400 DNA repair and recombination proteins [BR:sine03400]
    KI385_31560
DNA replication proteins [BR:sine03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    KI385_31560
Chromosome and associated proteins [BR:sine03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    KI385_31560
DNA repair and recombination proteins [BR:sine03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      KI385_31560
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: UKY52893
LinkDB
Position
6942650..6943306
AA seq 218 aa
MNKAQLVEAIADKLGGRQNAAEAVDAVLDAIVRATVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVAVKKAPKGSLTGGVAIKKAA
AKKATAKKAAAKKAAPAKKAAVKKTAAAKKVTAKKAAVKKATTAKKVTAKKAAAKKAAPA
KATAKKTAPAKKATAKKAPAKKATARKTTAKKTTARKR
NT seq 657 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagccattgccgacaagctcggcggccgccagaacgcc
gcggaggcggtcgacgccgtactggatgcaatcgtccgtgcaactgtctccggcgaccgt
gtttcggtcaccggattcggctcgttcgagaaggttgaccgccccgcccgctacgcccgc
aacccgcagacgggtgagcgcgtacgggtcaagaagacctcggttccgcgtttccgcgcc
ggtcagggtttcaaggacctggtgagcggctcgaagaagctccccaagggcggcgaggtc
gccgtcaagaaggctcccaagggcagccttaccggtggtgttgccatcaagaaggccgcc
gccaagaaggccaccgccaagaaggccgccgcgaagaaggcggcaccggcgaagaaggcc
gcggtgaagaagaccgcagcggcgaagaaggtcaccgccaagaaggccgccgtgaagaag
gcgaccacggccaagaaggtcaccgccaagaaggccgccgcgaagaaggcggcaccggcg
aaggcgacggcgaagaagaccgcccccgccaagaaggcgacggcgaagaaggcccccgcg
aagaaggccaccgcccgcaagaccaccgcgaagaagaccaccgcccgcaagcggtga

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