Streptomyces inhibens: KI385_33945
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Entry
KI385_33945 CDS
T08140
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sine
Streptomyces inhibens
Brite
KEGG Orthology (KO) [BR:
sine00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sine03016
]
KI385_33945
Enzymes [BR:
sine01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KI385_33945
Transfer RNA biogenesis [BR:
sine03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KI385_33945
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UKY53319
LinkDB
All DBs
Position
complement(7539658..7540932)
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AA seq
424 aa
AA seq
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MTDAQKTAADTTLRAPGDSPPDSRPAPVPLLEPREGIPPVTATDEALAEVVAAFAAGTGP
VAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSALGEAIGDAEWVLHAATQD
LPCLRDIGMVPTRLFDTELAGRLAGFARVGLGAMVENVLGFALEKGHSAVDWSTRPLPEP
WLRYAALDVELLVDLRDALEEELTQQGKLEWAHQEFAAIAAAPPPPPRKDPWRRTSGMHK
VRRRRQMAVVRELWTARDQVAQRRDVSPGKVLGDTAIVEAALNLPPNSHALAGLPGFGHR
MGRRQLEQWQAAVDRARALPESDLPQPGQPLNGPPPPRSWADKDPVAAARLSAARAAVTA
LAERLNLPQENLITPDTVRRLCWEPPALPTRETVAEVLVSHGARPWQIEQVAPILTEALL
TDAD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaaaagaccgcagcagacacgacactgcgagcacccggagactcgcct
ccggattcccgaccggcgccggtccctctcctggagccccgtgagggcatccctccggtg
accgccacggacgaggcgctcgccgaggtagtggcggccttcgcggccggtacgggcccg
gtggctgtcgacgccgagcgggcctccggctaccgctacggccagcgcgcctacctcgta
cagctgcgccgtgagggcgccggcagcgcgctgatcgacccggtcggctgccccgacctg
tcggcactgggcgaggcgatcggcgacgccgagtgggtgctgcacgccgccacccaggac
ctgccgtgtctgcgcgacataggaatggtccccacccggctgttcgacaccgagctggcc
ggacggctggccggcttcgcccgggtcggcctgggcgccatggtcgagaacgtcctcggc
ttcgccctggagaagggccactccgccgtcgactggtccacccgcccgctgcccgagccc
tggctgcgctacgccgcgctcgatgtcgagctgctggtggatctgcgcgatgcgctggag
gaggagctgacgcagcagggcaagctggagtgggcccatcaggagttcgcggcgatcgcc
gccgctcccccgccgccgccccgcaaggacccctggcgccgtacgtccggtatgcacaag
gtccgcaggcgccgccagatggccgtcgtacgggagctgtggacggcccgcgaccaggtc
gcccagcggcgcgatgtctcccccggcaaggtgctcggggacaccgcgatcgtggaggcg
gcgctgaatctgccgccgaacagccacgcgctggcggggctgcccggcttcgggcaccgc
atgggccgccggcagctggagcagtggcaggccgccgtcgaccgcgcccgcgcgctgccg
gagagcgacctcccacagcccggccagccgctcaacggcccgccgccgccccgttcctgg
gccgacaaggacccggtcgcggccgcccggctgtcggccgcccgcgccgcggtcaccgca
ctggccgaacgcctgaacctcccgcaggagaacttgatcaccccggacaccgtgcgccgg
ctgtgctgggagccgccggccctgccgacgcgggaaacggtcgccgaggttctggtgagc
cacggcgcccgcccctggcagatcgagcaggtcgcgccgatcctcaccgaggcgctgctg
acggacgccgactga
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