Singulisphaera sp. Ch08: V5E97_10480
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Entry
V5E97_10480 CDS
T11449
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sing Singulisphaera sp. Ch08
Pathway
sing03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V5E97_10480 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_10480 (recD)
Enzymes [BR:
sing01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V5E97_10480 (recD)
DNA repair and recombination proteins [BR:
sing03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V5E97_10480 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
NAT10_TcmA_helicase
AAA_16
AAA_22
SH3_13
nSTAND3
DEAD
PIF1
SLFN-g3_helicase
NPHP3_N
NTPase_1
AAA_5
CbiA
AAA_28
UvrD_C
RecD_N
AAA
Motif
Other DBs
NCBI-ProteinID:
XBH06437
UniProt:
A0AAU7CNF0
LinkDB
All DBs
Position
complement(2718694..2720793)
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AA seq
699 aa
AA seq
DB search
MRPLSELSPFGTARAAVSAGASSKGDDESALLAWLRPVRERLASSFNLEEEVAFLAWELG
RLPDGLSREERASLILMALTALVALGQGSTRIPFRDPAVRLDTARQLLPAEDLILGLDAA
KAVATADALIAERRVDAIVGGPEDFKPLIVDGPFLYLQKMRALEERFAEALRRRIKGDAD
GAGWPEAEVSAAVLDVEGRPAVRDGKALPLSHDQLAAVRVAASHRLAVISGGPGTGKTTI
VVSILRVLRRLGLPPEAMLLAAPTGKAAQRMGQAIQSGLRAIAKPTPEDQDLETLPEPRT
LHRLLGYSPSTGRFLHHENNRLAGRVIVVDEASMIDLVLMERLARSLRDDSRLVLLGDDH
QLPSVEAGAVLRDLLVETNDGPSPLGPRAVRLTESHRMRPDDPDGRNILTVSQAIDRGEP
PKFAARRTSDDVIVARSSFAEVEFHCGGVELLEAPEGSGVIDAWLDRWNREVVRSLPDFD
HLVGRRYILGRDGFHEADRVRLDQLFDHFDRARVLCLTRVLPTGADRINDLLHDRARAAR
PAGAFRDDDLIPGEPVMMQVNDYGRMLFNGDQGLVLLVSEGGRPSPMVVFRRADGFATHR
IGSLRSVLRRSYAMTVHKAQGSEFDRVALILPHADIPLNTREILYTALTRSRAAVTLVGS
REILARGIARTARRFSGVAERVRGPGPAHIKHAVAKELV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgagcgaactctctccgtttggaaccgcacgcgccgcggtcagtgcgggc
gcgtcctcgaagggcgacgacgagtccgcgctgctcgcctggctccggcccgtccgcgag
cggctcgcctcgtcgttcaacctggaggaagaggtggcgttcctcgcctgggagctaggc
cgactgccggacggcttgagccgggaggaacgagcctcgctgattctcatggccttgacc
gccttggtcgcgcttggccaggggagtacccggatcccgtttcgcgatccggccgtccgg
ctcgacacggcccgacagctcctcccggccgaagacctgatcctcggcctggacgctgcg
aaggccgtggcgacggcagacgcattgattgcagaaagacgtgtcgacgcaattgtcggt
ggtccggaagacttcaagcccttgatcgtggatggcccttttctctatctccagaagatg
cgggcgttggaggagcgattcgccgaggcgttgcggcggcgaatcaagggtgatgcagac
ggcgcaggctggcccgaggccgaggtctcggcggcggtgctcgacgtggaggggcgtccc
gccgtccgcgacggaaaggcgctcccgctctcccacgaccagctcgccgccgtccgggtc
gcggcaagccaccggttagcggtcatctccggcgggccggggacgggcaagacgacgatc
gtcgtttcgattctccgcgtgctccgccgcctggggctcccgcccgaggcgatgctcctg
gccgcccccaccggcaaggccgcgcaacggatggggcaagcgatccagtccggcctccgg
gcgatcgccaagccgacacccgaggaccaggacctggagaccctgcccgagccacggacg
ctccatcgtttgctcggctactcgccctcgaccggacgcttcttgcatcacgagaacaat
cggctcgccgggcgtgtgatcgtggtggacgaggcgtcgatgatcgacctggtgctgatg
gagcgactcgcgcggtcgctccgcgatgacagtcggctcgtgctgctcggcgacgaccac
cagctcccgtcggtcgaggcgggcgcagtgctccgcgacttgctggtggaaaccaacgac
ggcccttcgccactcggtcctcgcgcggttcggctcacggagagccaccggatgcgtccc
gacgacccggacggccgtaacattctgaccgtctcgcaagcgatcgaccggggcgagcct
ccgaagtttgccgcccggcggaccagcgacgacgtgatcgtggcgcgaagctcattcgcc
gaggtcgagttccattgcggcggggtcgaactccttgaagcccccgaaggctcgggcgtg
atcgacgcctggctcgatcgttggaatcgcgaggtcgtccgctcgctccccgacttcgac
cacctggtcggtcgccgctacatcctcggtcgagacgggttccacgaagcggaccgagtc
cggctcgaccagttgttcgaccacttcgaccgggcgcgagtgctctgtctgacccgcgtg
ctgccgacaggggccgatcggatcaacgacctgcttcatgatcgagctcgtgccgccagg
cccgcgggcgccttccgcgacgacgacctgattcccggtgaaccggtgatgatgcaagtc
aatgattacggccgcatgctcttcaatggtgatcagggactcgtcctgctcgtctccgaa
gggggccgcccctcaccgatggtcgtcttccgccgagccgacggatttgccacccaccgg
atcggttcgctccggtcagtcctgcgccggtcgtacgccatgacggttcacaaggcgcaa
ggctcggaattcgatcgcgtggccctgatcctccctcacgccgacattccgctcaacacc
cgtgagattctctacaccgctctgacccggagccgggccgcagtcacgttggtcggctct
cgcgagatcctggcacgtggaatcgcccgaaccgctcgccgtttttccggcgtcgccgag
cgtgtgcgaggcccagggccagcgcatatcaaacacgctgtagcgaaagaacttgtataa
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