Singulisphaera sp. Ch08: V5E97_10485
Help
Entry
V5E97_10485 CDS
T11449
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sing Singulisphaera sp. Ch08
Pathway
sing03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V5E97_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_10485
Enzymes [BR:
sing01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V5E97_10485
DNA repair and recombination proteins [BR:
sing03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V5E97_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
ResIII
DEAD
DUF87
Motif
Other DBs
NCBI-ProteinID:
XBH06438
UniProt:
A0AAU7CMZ3
LinkDB
All DBs
Position
complement(2720790..2724317)
Genome browser
AA seq
1175 aa
AA seq
DB search
MSVHYPRPAILDRIPHDRHTVIEASAGTGKTYTIEHLVIELILREKVSIDQLLVLTFTER
AAAELRQRIRAMIGKILGASCEGGLECRCDRSGTFWRVDDGRREQLRQALSSLDGASIGT
IHGFFARVLNEHAFAGGRLFDGTLEDGRTRFGRAFKTALRRVLARGPSDAADLLALWIDG
GNDGVDGLEKLLYQCHSSRRVVRPSFDLSALRLELEMNPLFEIDINDELKTIEKSLKGLK
VHASTTKAICTNHLPSIATKTSAGGRSLNLLGDKEFAKSLGYLAERLGDLSLDGPTARIR
DAVVELDDRFAPLKAAVIHTCLLPIVDELERMTATTGAFDFDGILAGAAAAVNGPDGESL
VNSLRDRFRFALIDESQDTDELQWAFFKRVFVESDRENFVYLIGDPKQSIYGFRGADVKA
FLAARARIVKDQEPATLGNNHRSTPELIAAYNLLLDASASPPFLEGEITYQMPVMPGRKL
VALDRDGSTSSPVHVLEIVPKGESLPKNELFRGLARQIAREAARLCTERTGLRFGEPGQE
RPIRAGDIFILIASNSDGPRIAEALREAGVPFAFYKQEGLFQTSEAAAVRDLLAAIDDPA
NLSKRSLAWITPFFSIPLDTLPDLFELPDSHPLLRRLIDWKDLADARRFEALFAHILDES
GIVRRELLFKDDERSLTNYLHLFEFLLEEVHATGGGLAELVATLDAYHQGVREPSAQDGN
VQRLESDRDAVQIMTIHKSKGLEAAVVFLYGGFTSNPSDGLYAYHDDEGTRVLDVDPDAK
AKETAKRENDEERQRLYYVALTRAKARLYLPFVPSEHMSKYWVGGYRRVNDRLAAVLDLP
EALSLFHRVPFRDEPIRATGDGPGRAPSSWRPRRLDLDEGDDSSEFAGLRDRHRAYEVTS
YSRMKRDWADDTEPIERDEHRREPGPVASSDALAVGDLPGGRAVGTFLHEIIEEIPLEET
AQAESLDAWRALESVARTVDAAMARNAIEPIYRAHAEAMIYEALTADVPVGGGRLIPGFC
RCRRSVREMEFLFPFPEEAHPGLSDPTPGKLIVERGFIKGFMDLVVENDGLAYVADWKGD
VLPSYDAESITAHVAKHYELQAKLYALALVKALRIHSEAEYESRFGGMIYVFLRALRQPG
LAGQGLYYSRPAWSDVLRHEAELIRFGERPFGGIR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcattacccgagaccggcgatcctcgatcggatcccgcacgaccggcatacc
gtgatcgaagcgtcggccggaaccggcaagacgtacacgatcgaacatctggtcattgag
ctcatcctgagagagaaggtctccatcgaccaactcctcgtgctcaccttcaccgaacgt
gccgccgccgagcttcggcagcggattcgagcgatgatcggcaagatcctcggcgcatcg
tgcgaagggggactcgagtgtcgctgcgaccgctcgggcacgttctggcgcgtcgacgac
gggcggcgagaacaactcaggcaagctctctcctccctcgacggtgcctcgatcggcacg
atccacggtttcttcgcccgggtgctcaacgaacatgccttcgccggcggtcgcctcttc
gacgggaccctcgaagatggccggacccggttcggccgcgccttcaaaacggccctgcgc
cgggtcctggcccgaggcccgagcgatgccgccgacttgctcgcgctctggatcgacggg
ggcaacgatggcgttgacggcctcgagaaattgctctaccaatgccattcctcgcggcga
gtggtccggccctccttcgacctctccgccctccgtctcgaactcgaaatgaatccactc
ttcgagatcgatatcaatgacgaactgaaaacgatcgagaaatccttaaagggcctgaag
gttcacgcaagcacgaccaaggcaatttgcaccaaccatctcccgtccatcgcgaccaaa
acgagtgcgggcggccgctctctgaatctcctgggggacaaggagttcgccaagtcgctg
ggctacctcgccgagcggctgggcgatctctcgctggatggccccaccgcccgaatccgc
gacgcggtcgtcgagctcgacgaccggttcgcccccctcaaagccgcggtgatccatacc
tgcttgctcccgatcgtcgacgaactggaacgaatgacggcaaccaccggggccttcgac
ttcgacggaatcctcgccggagccgccgcagcggtgaacgggccggacggcgagtcgctt
gtgaattcgctgagggaccgcttccggttcgcgttgatcgacgagtcgcaggacaccgac
gagcttcaatgggccttcttcaaacgcgttttcgtcgagagcgatcgtgaaaacttcgtt
tacctgatcggtgacccaaagcagtcgatttatgggttccgcggcgccgatgtgaaggcg
ttcctcgcggccagggcgaggatcgtcaaggatcaggagccggccacgctcgggaacaac
caccgatcgacccccgagctgatcgccgcgtacaacctcctactcgacgcgtcggccagt
ccgccctttctcgaaggcgagatcacgtatcagatgcccgtgatgccgggccgaaaactg
gttgcgctcgatcgagacggttcgacctcgagcccggtccacgtcctcgagattgtgccg
aaaggtgaatcgctccccaagaatgagctctttcgagggctggcccgccagattgcgcga
gaggccgctcgcctctgcacggagcgcaccggccttcggttcggcgagcctggccaggag
cggccgatccgggcgggggacatcttcatcctgatcgcgtcgaactcggacggccctcgc
atcgcggaggcgcttcgcgaggccggcgtgccgttcgccttctacaagcaagagggtttg
ttccagactagcgaggccgcggccgttcgtgacctgctcgcggcgatcgacgaccccgcc
aacctctcgaaacgcagcctcgcctggatcaccccgttcttctcgattcccctcgacacc
ctgcccgacctgttcgagctgcccgattcccacccgctccttcgaaggctgatcgactgg
aaagacctggccgacgcccggcggttcgaggccctcttcgcccacatccttgatgaaagc
ggaatcgtccgccgcgaactgctcttcaaggatgacgaacggtccttgacgaactatctt
cacctgtttgaatttcttctggaagaagtccacgccaccggcggcgggctcgccgaattg
gtggcgactctcgacgcctaccaccagggcgttcgcgaaccgtccgcccaggatggcaac
gttcagcgtctggaaagcgaccgcgacgccgtgcagatcatgaccatccacaaaagcaaa
ggtctggaagcagccgtcgtgttcctctacggcggcttcacgtcgaatccctcggacggg
ctttacgcataccacgacgacgaaggcacgcgtgtccttgatgtcgatcccgacgccaag
gccaaggagactgcgaaacgcgaaaatgacgaggagcgacaacggctctattacgttgcc
ctgacccgggccaaggctcggctctacctcccgttcgtgccaagcgagcacatgagtaag
tactgggttggtggataccgccgcgtcaacgaccggctcgcggccgtgctcgacttgccc
gaggcgttgagcttgttccaccgcgtccctttccgtgacgaaccgatccgggcaacgggc
gacggcccggggcgtgccccctcctcgtggcgtccccgacggctcgatctcgacgagggc
gacgactccagcgagttcgccgggcttcgcgaccgccaccgagcctacgaggtgacgtcg
tactcccggatgaagcgcgactgggccgacgacaccgaaccgatcgaacgcgacgagcac
cgccgcgaacctgggccggtggcaagctccgacgcgctggccgtgggggacctgccgggg
ggccgggccgtcggcaccttccttcacgagatcatcgaggagattccactcgaggaaacc
gcccaggccgaatcgctcgacgcctggcgtgcactcgagagcgtcgcacggaccgtcgac
gccgcgatggcgcgcaatgcgatcgaaccaatctaccgcgcccacgccgaggcgatgatt
tatgaggccctcacggctgatgtgcccgtcggtggcgggcgcctgattcccggcttttgc
cgctgccggcggtcggtccgcgagatggaattcctgttcccgttcccggaggaagcgcac
ccagggctctccgaccccacgcccggcaagctcatcgtcgaacgtgggttcatcaaggga
ttcatggatcttgtcgtcgaaaacgatggtctggcgtatgtcgccgattggaagggagac
gtcctgccgtcctacgacgccgaatccatcacggcccacgtcgccaagcactacgagctt
caagcgaagctctacgccctggcgctcgtcaaggcgcttcggatccattcggaagcagaa
tacgagagtcggttcggtggcatgatctatgtcttcctccgggcgttgcgtcagcctggg
cttgccggtcaggggctctattactctcgaccagcctggagcgacgtgctccgtcatgag
gcggaattgatccgattcggcgaacgacccttcggagggattcgatga
DBGET
integrated database retrieval system
