Singulisphaera photorubra: V5E97_30780
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Entry
V5E97_30780 CDS
T11449
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sing Singulisphaera photorubra
Pathway
sing03030
DNA replication
sing03430
Mismatch repair
sing03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V5E97_30780 (holA)
03430 Mismatch repair
V5E97_30780 (holA)
03440 Homologous recombination
V5E97_30780 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sing03032
]
V5E97_30780 (holA)
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_30780 (holA)
Enzymes [BR:
sing01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V5E97_30780 (holA)
DNA replication proteins [BR:
sing03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V5E97_30780 (holA)
DNA repair and recombination proteins [BR:
sing03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V5E97_30780 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
XBH02676
LinkDB
All DBs
Position
8229926..8230930
Genome browser
AA seq
334 aa
AA seq
DB search
MHAIDFLKDPTKVPVKPVYAVFGDDLFLRRESLETIRRQILHGDDEEMGLTRFAGEHASL
ADVIDEVRTLPIFAKRKVVIVDGADPFVTTHRKELEAYVEHPSTAGVLVLAVKLWPSNTK
LAKSLEKVGLSIECKGPAERVLSAWLVHMAKVRSEVRLDSDAASLLIELVGTEVGLLISE
IEKLAVFVGASARIQRDVVAKMVGAGRIEDVWNVLNATTTGRSELALELLDRLLGAGEHP
IYLLAAMSASLRKVHHAGQLRRNRMTLEQACEEAGIKFARDKVRLQHSHLGPRRVDQLPR
LLLQADLDLKGASNLPPRVVIEKLLTELARPRQD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccatcgactttctcaaagatccgacgaaggtgccggtcaaaccggtctacgcc
gttttcggtgacgacctgttcctgcgcagggagagcctggaaacgattcgtcgccagatt
ctccatggggatgacgaggagatggggctgacccgattcgccggggagcacgcctctcta
gccgatgtcatcgacgaggtccgcaccttacccatcttcgcgaaacgcaaggtcgtgatc
gtcgacggggccgacccgtttgtcaccacgcaccgcaaagagctcgaggcctatgtcgag
catccctcgacggccggcgttttggtcctcgcggtcaagctttggccgtcgaatacgaag
ctcgccaagtcattggaaaaggtcggcctttccattgaatgcaaggggccggccgaacgg
gtcttgagcgcctggctcgtccacatggccaaagtacgctccgaagtccgacttgattcc
gacgccgcctcgctcttgatcgaactggtcgggaccgaagtggggcttctgatctccgag
atcgagaagctggccgttttcgtcggtgccagtgcgcggattcagcgcgacgtcgtggcg
aaaatggttggtgcggggcgtatcgaggacgtttggaacgtgctcaacgccaccacgacc
ggacgctctgagctcgccctcgagcttctcgatcgcctgctcggagccggagagcatccg
atttatctgcttgcggcgatgagtgcatcgctgcgcaaggttcatcacgcagggcagtta
cgaagaaatcggatgaccctggaacaggcctgtgaggaagccgggatcaaattcgcccgg
gacaaggttcgccttcagcattcccacctcggtccgcgccgggtcgatcaactgcctcgc
ctcttgcttcaagccgacctcgacctcaagggagcatccaacctgccccctcgagtggtc
attgagaagctcctgaccgaactcgcccgcccccgacaggattag
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