Singulisphaera photorubra: V5E97_32355
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Entry
V5E97_32355 CDS
T11449
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sing Singulisphaera photorubra
Pathway
sing03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V5E97_32355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_32355
Enzymes [BR:
sing01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
V5E97_32355
DNA repair and recombination proteins [BR:
sing03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V5E97_32355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
XBH02966
LinkDB
All DBs
Position
complement(8709085..8709972)
Genome browser
AA seq
295 aa
AA seq
DB search
MERQTVTYELDYSPPLDWPFFLQYLGARATVGVEAVEGERYVRTFAWEGCSGSLSLSQHP
TDARLLLTIRGEVGAHSEAILGRVRQMFDLDTNLALVHAVLGTDPHLGPLLAASPGIRVL
GAWSPFELLVRTIVGQQVTVKAATTIMGRIVSRLGKAVVALNPGGPSFLFPTPRTIADGN
LEAIGMPSKRVLTLQNVARAIADATITFPEPDGDVVGVKEALLKMPGIGPWTVEYFALRA
LRDADSWPGTDLVIRRILEQFERAGPAIQVEQWRPYRGYAAVHLWNKATRDKTRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcaaaccgtcacatatgaactggattactcacccccgttggattggcccttt
ttcctccaatatctgggagccagggctacagtcggggtcgaggcggtggaaggtgaacgc
tacgtccgtacgttcgcgtgggagggatgttccggttcgctctccctctcacagcacccg
acagacgcccgactcctgctcacgatacgaggtgaggtcggagcgcactccgaggccatt
ctcgggcgggtccggcagatgttcgacctcgataccaacctggccttggtgcacgccgtc
ctgggtaccgatcctcacctcggtcccctcctggccgcatccccgggcatccgcgtcctc
ggcgcctggtccccgtttgaactgctcgtccgaacgatcgtcggccagcaagtgactgtg
aaggcggcgacgaccatcatgggccggattgtcagccggctcggcaaagcggtcgttgct
ctgaatccaggtgggccgtcgttcctcttcccgacgcctcgcacgattgccgacggtaat
ctcgaagcgattggcatgccgtcgaagcgggttctcaccttgcagaacgtcgcccgggcg
atcgccgacgcgaccatcacattcccagaacccgatggggacgtggttggggtgaaggaa
gctcttttgaaaatgccagggatcggaccttggaccgtggagtacttcgcgctgcgggcg
ctacgcgatgccgattcctggcctggaaccgatcttgtgatccggcgaatcctcgaacaa
ttcgagcgtgcaggccccgcaatccaggtcgagcagtggcggccttatcgcggatatgcc
gcggtgcatctctggaacaaagccactcgcgataaaacaagaaattaa
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