Singulisphaera sp. Ch08: V5E97_33230
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Entry
V5E97_33230 CDS
T11449
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sing Singulisphaera sp. Ch08
Pathway
sing03030
DNA replication
sing03430
Mismatch repair
sing03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V5E97_33230
03430 Mismatch repair
V5E97_33230
03440 Homologous recombination
V5E97_33230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sing03032
]
V5E97_33230
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_33230
Enzymes [BR:
sing01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V5E97_33230
DNA replication proteins [BR:
sing03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V5E97_33230
DNA repair and recombination proteins [BR:
sing03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V5E97_33230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
XBH03134
UniProt:
A0AAU7CD12
LinkDB
All DBs
Position
8943339..8944106
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AA seq
255 aa
AA seq
DB search
MLKNIRLERPLAVIDLETTGIDTKIDRIIEISVLKLFPGGDADHRTRRVNPGVPIPPEAT
AIHGITDDDVADMPSFRGIAPSLTRFLDGCDLAGFNVLNYDLKLLVAEYNRVGLGFTVAG
RKVIDACKIYHGREPRDLTAAFRFYCGLEHEGAHGAAADVLATAAILDAQVARYHDLPST
VDGLHGHCNDPSAMDMGGMFGKDEDGVIVLIRGKYKGRSLNDIAQAKPDYLEWMQREDFF
DDTKRIALEALKQAS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagaacatccgattggaacgccccctggccgtgatcgaccttgaaacgaccggg
atcgacacgaaaatcgaccggatcattgagatcagcgtgttgaagctgttccccggtggt
gacgccgatcatcggacccggcgggtgaaccccggcgtgcccataccgcctgaagcaacg
gcgattcatgggatcacagacgatgacgtggccgacatgccgtctttccgggggatcgcc
ccgagcctgaccagattccttgatggatgcgacctggccggctttaacgtcctcaactac
gacctgaagttgcttgttgccgagtacaaccgggtcggactcgggttcacggtcgccgga
cggaaggtcatcgacgcctgcaagatttaccacgggcgggagcccagggatctgacggcc
gccttccggttttattgcggcctcgaacacgagggggcacacggggcggcggcggacgtg
cttgcgacggcggcaatcctcgatgctcaggtcgcgcgctatcacgacctccccagtacg
gtggacggtctccacgggcactgtaacgacccgagtgccatggatatgggcgggatgttc
gggaaggatgaggacggcgtaatcgtgctgatccggggtaagtacaaggggaggtcgctg
aacgacatcgctcaggccaagccggactacctggagtggatgcagcgtgaagacttcttc
gacgatacgaagcggatcgccctggaggcgctcaagcaggcgtcctga
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