Singulisphaera sp. Ch08: V5E97_38330 Help Entry V5E97_38330       CDS       T11449                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism sing  Singulisphaera sp. Ch08 Brite KEGG Orthology (KO) [BR:sing00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sing03400]     V5E97_38330 Enzymes [BR:sing01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      V5E97_38330     5.6.2.6  RNA 3'-5' helicase      V5E97_38330 DNA repair and recombination proteins [BR:sing03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     V5E97_38330 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C WHD_2nd_Lhr ResIII MarR_2 FeoC Motif Other DBs NCBI-ProteinID:  XBH04114 UniProt:  A0AAU7CFH9 LinkDB All DBs Position 10328529..10332935 Genome browser AA seq 1468 aa AA seqDB search MSRNDGLDGFLPVVAAWFRTTFGAPTPPQQSGWPAIAEGRNTLIFAPTGSGKTLAAFLAC LDHLWRTPRRAPGARILYISPLKALNQDVYRNLQMPLEGILETARATGTELAPLTVAVRS GDTSPADRQKLVRKPPDILITTPESLHLMLTSRARETLRSLSHVIIDEIHALCPNKRGVF LALLLERLEAINPNGFVRVGLSATQRPLDEVARYLGGCRIKTGPGSKTRLEPRPVTIVDT GHRKELDLQILVPFERPGPVAPGTTWPAIERRLLELIRAHRSTIIFANNRRVVERLTSHL NELEEEHETPVTSLVRSHHGSLSLEERRNTEEALKGGELQAVVATASLELGIDMGAVDLV CQVESPGSVARGLQRVGRAGHVVGRVSKGRLIAKTASDLLESAALCRAMVGGTVESLRVP NGCLDVLAQQVVACVAMDRWDVPALFDLVRSAYPYAKLSPSAFDSVLRMVAGRFPTETFR DLRARVTWDRVHNRLHALPGSARLAVTSGGTIPDTGQYPVYLGNEGPRLGELDEEFVLER RVGETFVLGTATWRIEAIEAHRVVVARAEGQAAMMPFWRGEDAARTAELGEAVGALSREL VERLDDPGLSAWLQSDCHLEPAAAESLRDHFARQVRTVGAAPDDRTVVIESFRDPAGEMG VAVLTPFGGKLHQALKLALQGRLRERLGISLSCLHADDGILIRLPQNDDPPLDLFDGLTA ELAERLIRDELGESALFGLRFRQNAGRALLMPRPDPSKRTPLWLQRLRAKDLLQVVRQFP DFPIVVETYRECLNDDLDLPRLRLFLDRVASGAIRIVTRRGEIASPFAADLIFRFTSQFL YQWDEPRRADRQAGRAAVDEGLLDPLLDPASQAHWLDPNAIGQVDSRLREVGRPPRTVDE MAETLLRLGDLAPGELSGPMLGFLVELHAQGRAAEIELPGTAEPSRWISAEESILYASAF ASEPSDAGQETIVRRFLSTHALVGLDELLRRYPLDPAAATDLLERWEEQGRLIRLEPAGD SGEPLWAERRNLEEVRRLSIALRRRESVAVSPEVFADFVARRQHVHPATRWEGQAAVALI LDQLAGFATPADLWETDILPRRLRDFRAAWLDDLLSAGGWSWRAEGETKGEPRVGFAPRD FVGGWPLPDAPPTLSDNESRVLAELEGRGASFATDLTRHLGLEPSRTRLALDRLLRLGLA TNDRFDPLRPGGSAMTEALTRASAAAAGHRPSLQRSRPSLRRTASSRPEGRWSRLESVEA DPETSHLAWAAVLLERYGVLARETAALDTWCPPWRNLAPWLARAELRGELRRGYFVEGLS GVQYATLDVAEALAKRAGDREPTPEFVLISSLDPANLYGSGAPFDIDLLNGGTARLPRNP TNFLVLRDGRPILIIEAGGKRLSGLASASELDLRGALALVPKLAGPSRRVLKVETYNTSP AIESPAAPWLAELGFVRDYPGMTYYAGW NT seq 4407 nt NT seq  +upstreamnt  +downstreamnt atgtcacgcaacgatggcctggacggctttctgccggtcgtggccgcctggtttcgaacc accttcggtgcgcccacccctcctcagcaatcaggctggccggcgatcgccgagggccga aacacactcattttcgcccccaccggttcgggcaaaacactggcggcattcctggcctgt cttgaccatctctggcggacgccaaggcgtgcacccggggcgcgaatcctctatatctca ccgctgaaggccctgaaccaggacgtctatcgcaaccttcagatgcctctcgaggggatc ttggagacggctcgcgcaaccggtacagagttggctccgctcacggttgcggtccggagc ggtgatacgtccccggctgaccgccagaagctcgtccgcaagcctcccgacatcctgatc actacgcccgagtcgctgcacctgatgctgacgagccgggcccgagagactttacggtca ctctcccacgtgatcattgatgagatccacgccctttgccccaacaaacgcggtgtgttc ctcgccctcttgctggaacgtctggaggcgatcaaccccaatgggttcgtccgcgtgggc ctttcggccacccagcggccgctcgacgaagtcgcgcggtacctgggcggctgccggatc aaaaccggccccggatcgaagactcgactcgaaccgagaccggtgacgatcgtcgacacg gggcaccgcaaagagctcgacttgcaaatcctcgtgccgttcgagcggccaggacccgtc gcccccggcacgacctggcccgccatcgaacgccgactcctcgagctcattcgcgcgcac cgctcgacgatcatcttcgccaacaaccggcgggttgtggaacggctgacctctcatctg aacgaactcgaagaagaacatgagacgcccgtcacctcgctggttcgctcgcatcatggc agcctgagtctggaagaacggcggaacacggaagaggctctgaaggggggcgagcttcaa gccgtggtggccacggcgtcactggaactcgggatcgacatgggcgcggtcgacttggtc tgccaggtcgaatcgcccggcagcgtagcgcggggacttcagcgggtcggccgcgcgggg cacgtggtcggtcgggtcagtaaggggcggctcatcgccaagacggccagcgacctcctg gaatcggcggcgctctgccgcgcgatggtgggcggcacggtcgagtcgttgcgcgtgccg aacggttgtctcgacgtgctcgcccagcaagtggttgcctgcgtggcgatggatcgctgg gatgtccccgcgctcttcgacctggtccgttcggcgtatccctatgccaagctctccccg tccgcattcgacagcgtgcttcgaatggttgcgggtcgattccccaccgagaccttccgc gacctccgggcccgggtgacctgggaccgggtccacaaccgcctgcacgcgctgcccggc agcgcacggctcgcggtgaccagcggtgggacgatcccggacaccggccagtaccccgtc tatctgggcaatgaggggcctcggctgggtgagctcgacgaggaattcgtcctcgaacgc cgggtgggagagaccttcgtgctcgggaccgccacctggcggatcgaggccattgaggcg caccgagtcgtggtggctcgggccgaggggcaggccgccatgatgccgttctggcgcgga gaggatgcggcaaggaccgcggagctcggcgaagccgtgggagccctgagccgcgagctg gtcgagcggctcgacgacccggggctgtcggcctggcttcagtccgactgtcatctcgag ccggccgcggcggagtcgttgcgcgaccacttcgcgcgtcaggtcaggaccgtcggagcc gcccccgacgaccggaccgtcgtgatcgagtccttccgcgatccggccggcgagatgggg gtggccgtactcactcccttcggcggtaaacttcatcaggccttgaaacttgcccttcaa ggccggttgcgggagcggttgggaatctctctgtcctgccttcacgccgacgatgggatc ttgattcgcctgccccagaacgacgatcctcccctcgacctgttcgacggccttaccgcc gaacttgccgagcggctgatccgtgacgagcttggggagagcgccctgttcgggctccgg tttcgccagaatgccgggagggcgctactcatgccccggcccgacccgtcgaagcgaacg ccgctctggctccagcggctccgggctaaggacctgctgcaagtcgtccggcaattccct gacttcccgatcgtggtcgagacctaccgtgaatgtctcaacgacgacctcgacttgccc cgactccgcctctttctcgaccgcgtcgcctcgggtgccatccggatcgtgacgcgccgc ggtgagatcgcctccccgttcgcggccgacctcatctttcgctttacctcccaattcctt tatcagtgggacgagccccgacgagccgatcgccaagcgggccgggcagcggtggacgaa ggccttctcgatccgttgctcgacccagcaagccaggcgcactggctcgaccccaacgcg attggtcaggttgacagccggctccgtgaggtcggccgcccccctcgcacggtcgacgaa atggccgaaaccctgcttcgactgggagatctcgcaccaggcgagttgagcggcccgatg ctcggcttcctcgtcgagcttcacgcgcagggcagggccgcggaaatcgagctcccaggc acggccgagccctcccgctggatcagcgcggaggaatcaatcctctatgcgtcggccttt gccagcgaaccgagcgacgctgggcaagagacgatcgtccgccgtttcctcagcacccac gccctggtcggcctcgacgaactcctccgccgctacccgctggacccggcggcggcaacc gacctgcttgaacgttgggaagagcaggggaggttgatccgcctcgagccggccggcgac tcgggcgagcccctctgggccgagcggcgaaacctcgaggaggtccgtcgcctctccatc gccctgcgacggcgggagagtgtggccgtctcccccgaagtcttcgccgactttgtggcc cgccgtcagcacgttcatccggcaacgcgctgggagggacaagcggcggttgccctgatc ctggaccagctcgctgggttcgcaaccccggccgacctctgggaaaccgacattttgcca aggcggctacgcgacttccgcgcagcctggctcgacgacctcctctcggccggtggctgg tcctggcgagccgaaggggagaccaagggggagccacgcgtcggcttcgcacctcgtgac ttcgtcggcggctggcccctccccgacgctccccccaccctctcggacaatgagagccga gtcctcgccgagctcgagggtcgaggcgcctcgttcgcgaccgacctgactcggcacctg ggcctcgaaccctcacgcacgcggctggcgctcgatcgcttgctccggctcggcctggcc acgaacgaccgattcgatcccctccgacctggcggttccgcaatgaccgaggcactcacc cgcgcctcggcggccgccgcggggcaccgaccgagcttgcagcgttcccgtccctcactt cgtcgtaccgcatcgagtcgtcccgagggacgctggtcgcggttggagtcggtggaggca gatcccgagacaagccacctcgcctgggccgcggtcctgctcgaacggtacggtgttctg gctcgcgaaacagccgcactcgacacgtggtgccctccttggcgcaacttggccccctgg ctcgcccgggcagagttgagaggcgagctccggcgaggctattttgtggaggggctctcg ggcgttcagtacgcaacgctcgacgttgccgaagcgttggccaagcgagcaggcgaccgg gaacctactcctgagttcgttttgatctcatccctggacccggccaacctatacggctcg ggagcgccgttcgacatcgacctgctcaacggaggaaccgcgcggttacctcgcaatccc acaaatttcctggtcttacgggatggccgcccgatcttgatcatcgaggcaggcggcaaa cggctgtcgggcctggcttcggcctcggaactggacctgcgcggggccctggccctggtt cccaagctggcaggaccgtcgcgaagagtgctgaaagtcgagacctacaacaccagcccc gcaattgagagccccgccgccccttggttggccgagcttgggttcgtgcgcgattatccg ggaatgacgtattacgcaggttggtag

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