Sinomicrobium kalidii: LS482_00475
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Entry
LS482_00475 CDS
T07760
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh03030
DNA replication
sinh03430
Mismatch repair
sinh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LS482_00475 (holA)
03430 Mismatch repair
LS482_00475 (holA)
03440 Homologous recombination
LS482_00475 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinh03032
]
LS482_00475 (holA)
03400 DNA repair and recombination proteins [BR:
sinh03400
]
LS482_00475 (holA)
Enzymes [BR:
sinh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LS482_00475 (holA)
DNA replication proteins [BR:
sinh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LS482_00475 (holA)
DNA repair and recombination proteins [BR:
sinh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LS482_00475 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DUF5858
Motif
Other DBs
NCBI-ProteinID:
UGU16358
LinkDB
All DBs
Position
complement(117587..118591)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVKRIVADIQKGDIKPVYVLMGEEPYYIDRIAEFIEDNVLSEEEKGFNQVVLYGKDVA
VGDIVESAKRYPMMAERQVVIVKEAQELSRTIENLAPYAENPQPTTVLVLCYKYKSLDKR
KKLYKAVKKSGVLFQSKKLYENQVGDWIRRVLAGRKYAISPKAALMLVEFLGTDLGKINN
ELEKLQLILPEGTEITPSHIEENIGISKDYNNFELRKAIGEKDVVKATRIIHYFGQNPKD
NPLVVTVALLFNFFSQLLQYHGLNDHSPRSVAGALRINPYFVKEYEAAARNYPMKKVSRA
VAVLREMDVKGKGVGASNIPQADLLKELLVRIMN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtaaaacggatagtagcagatatacagaaaggggatataaaaccggtttac
gttttgatgggggaggaaccgtattatattgacaggattgcggaatttatagaagacaat
gtactttctgaagaagagaaggggttcaaccaggtggtgctctacggaaaggatgtcgct
gtgggcgatatagtggaaagtgcaaagcgttacccgatgatggccgaacgacaggtggtt
attgtcaaggaagcccaggagctttcaaggaccattgagaacctggccccttatgcggaa
aatccacaacccactacggtcctggtactgtgctacaagtacaagagtctggacaagcgg
aagaaattgtacaaggccgtaaaaaagagcggtgtgttgttccagagtaaaaaactgtac
gaaaaccaggtaggcgactggataagaagggtgctggccggaagaaagtacgccatttcg
ccgaaagcggcactgatgctggtggagtttttgggtacggacctgggcaaaataaacaac
gaactggaaaaattacagcttatcctgcccgaaggtacggaaatcaccccgtcccatatt
gaagagaacatcgggataagcaaggattataacaactttgaacttcgaaaggctatcggt
gagaaggatgtggtaaaagccaccaggatcatccattatttcggtcagaaccccaaagac
aacccgttagtggtcacggtagcgctattatttaactttttttcccagttattgcagtat
cacgggcttaatgaccattctccgcgaagtgtggccggtgctttgcgcattaacccttat
tttgtgaaagaatacgaggcggctgcccggaattaccccatgaagaaagtgagcagggct
gtagccgtgttacgtgaaatggatgtcaagggaaaaggggtcggagcctccaatatacca
caggccgatctgttgaaagaactgctggtaaggattatgaactga
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