Sinomicrobium kalidii: LS482_04620
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Entry
LS482_04620 CDS
T07760
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh02024
Quorum sensing
sinh03060
Protein export
sinh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LS482_04620 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LS482_04620 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LS482_04620 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sinh02044
]
LS482_04620 (secDF)
Secretion system [BR:
sinh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LS482_04620 (secDF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
UGU17156
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Position
complement(1146433..1149432)
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AA seq
999 aa
AA seq
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MQNKGLIKLFAILFGIVSIYQLSFTFITNKVEDKAETFAINKIPESTEGYVVKREVEETR
YLDSIGNETVFDVGVASFTYNEAKDKELNKGLDLKGGINVILEISVKDILKGLANNSKDP
VFNKALANADKASKNSDKPYVDLFFQEFEAIKGDAKLASPDIFANKILSEEINFQMSDNE
VKPVIRRKVDESIVSAFEVLRKRIDRFGVTQPNIQRLGTTGRILVELPGAKDINRVKRLL
QSTAQLEFWETFKNEEVMQYLMQVNERLRTIVKTSSKQEEPQQEDASEIDSLLADAEQDS
LESVGQANPLFDLAVAPGAQGGPVLMSFATKDTAQVNAYLNMREIKQLLPAELQNARFAW
SKPGANEEVIDLYALKSNREDQPPLSGGVVVDAQQTYDQRGNPAVSMQMDGKGAKIWEEL
TGKAYREGNFIAIVLDNIVYSAPGVTSGPISGGNSEITGQFTLNEAIDLANVLRAGKLPA
SADIIQSEVVGPSLGQEAINSGMMSFIIAMVLVLLWMLFYYGRAGWFADVALIFNIVLIF
GVLAGLGAVLTLPGIAGIVLTIGMSVDANVLIFERIKEELSKGKGQMQAVADGFGNALSS
ILDANITTGLTALILFIFGTGPIQGFATTLMIGIATSLFTAIFITRLLVDWYIGRKKSLQ
FATGITKNLFRNVNIDFLAKRKMSYTISGVILIVAVGSLFTQGLNQGVDFVGGRSYQIRF
EHPVNPTELATELNDGLGSVEVKTFGAANQVKVTTKYKVDEEGTEIDREIQDILYTTLQK
HLPEGLSESEFVSGGDSKQYGIMQSVKVGPTIADDIKRNAIWAIVGSLIVVFLYILLRFR
KWQFSIGAVAAVFHDVLIVLGVFSLTYKFMPFNMEIDQAFIAAILTVIGYSLNDTVVVFD
RIREITSERGWKAGQNINLAINSTLSRTLNTSLTTLVVLLAIFIFGGESIRGFMFALIVG
VIVGTYSSVFIATPIMFDTLKNKGENVLKKKEEETEAEK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaagggacttatcaagctttttgctattttatttggaattgtaagtatttat
cagttatccttcacttttattacgaataaggtagaagataaagctgaaacatttgcaatt
aacaaaattcccgaaagcacggaaggctatgtagtaaaaagggaggtggaagaaaccagg
tacctggattctataggcaatgagacggtttttgatgtcggggttgcgagttttacctat
aatgaggcaaaagataaagaactcaacaaaggactggaccttaaaggaggaataaacgtt
atcctggagatatcggtaaaagatattttaaaaggattggccaacaattccaaagatcct
gtgtttaacaaggctctggccaatgcggacaaagcgtccaaaaacagtgataagccctat
gtggaccttttcttccaggaattcgaagcgataaaaggagatgcaaaactggcttctccg
gacatctttgccaataaaatactcagtgaagagatcaatttccagatgtccgataacgag
gtgaaacccgttatccgcaggaaagtggatgagtccatcgtgtctgcttttgaagtactc
cgcaagcgtatagaccgttttggtgttacccagcccaatatacaacgactcgggactacc
gggcgtattcttgtggaacttcccggagccaaggatataaaccgggtgaaaagactgttg
caaagtaccgcccagctggagttctgggagactttcaagaatgaagaggtcatgcagtac
ctgatgcaggtgaacgaaaggttgagaaccattgtaaaaacttcttcaaaacaggaagaa
ccgcaacaggaagacgcttctgagatcgactcgcttctggccgatgcggaacaggattca
ctggagtctgtagggcaggccaatccgttgttcgacctggccgtagcccctggggcacag
ggcggtccggtattgatgagttttgctaccaaggataccgctcaggtaaatgcatacctg
aatatgcgtgaaataaagcaattgcttcccgccgaattacagaatgcaaggtttgcctgg
agcaaaccgggcgctaacgaggaggtgattgacctttatgccctgaaatccaacagggaa
gatcaacccccgctgagtggcggagttgtggtagatgcgcaacagacttatgaccagaga
ggaaaccctgccgtttccatgcagatggacggtaagggtgccaagatatgggaagaactt
accgggaaagcctatcgcgaaggaaattttatagctattgtactggataatatcgtgtac
tctgctcccggtgtaaccagcggacctatttccggtggtaattctgaaattaccgggcaa
tttacacttaatgaggcgatagaccttgccaatgttctccgtgcaggtaaactgccggct
tcggcagatattatacaaagtgaggttgtagggccttcactgggacaggaagccataaac
agcggtatgatgtcgtttatcattgccatggtgctggtgctgttgtggatgttgttctac
tacggccgtgcaggatggtttgccgatgttgcccttatatttaatattgttctcatcttt
ggcgtactggcaggtctgggagcggtattgacccttcccggtatagcaggtattgtactg
accatcggtatgtctgtagatgccaatgtactgattttcgaaaggatcaaagaagaactt
tcgaaaggaaaaggacaaatgcaggccgttgccgacggttttggcaatgcactgtcctct
atcctcgatgccaatatcactacgggacttacagcacttatcctgttcattttcggtacg
ggccccatccagggattcgcaacgacattgatgataggtattgctacctccctgtttacc
gctatctttattacaaggttgctggttgactggtatatcggaaggaaaaaatccctgcag
ttcgctaccgggatcaccaaaaatctgttccggaatgtcaatattgattttctcgctaaa
cggaaaatgtcctataccatttccggggtcatactgattgtggcagtgggctccctgttt
actcaaggactgaatcagggtgtggattttgtgggcggacgctcctatcagatacgcttt
gaacatcctgtgaaccctaccgaactggctactgaactcaatgacggactgggaagtgtg
gaggtaaaaactttcggggctgccaatcaggtaaaagtaacaaccaaatacaaggtggac
gaagaaggtactgaaatcgatagagaaattcaggatattctttataccaccctgcaaaaa
caccttccggaaggattgtcggaatctgaatttgtaagcggaggggactccaagcaatac
ggtattatgcagtctgttaaagtaggtcctactattgcagatgatataaaacgaaatgcc
atatgggccattgtaggctcacttattgtagtgttcctgtacattttattgcgtttccgc
aaatggcagttctctataggggctgttgcagccgttttccacgacgtgcttattgtactc
ggggtattctcgctgacttacaagttcatgccgttcaatatggagatcgaccaggcattt
attgccgccatacttacggttatcggttattccctgaacgatacggtggtagtgtttgac
cgtatccgggagatcacttccgagaggggctggaaagccgggcaaaatattaacctggcc
ataaacagtaccctgagccgtacgctgaacacctcacttaccacattggtggtgcttctt
gccatttttatctttggtggagagtccatccgcggatttatgttcgcattgatcgtaggg
gtgatcgtcggaacgtattcttccgtatttatagctacacctatcatgttcgatacttta
aagaacaaaggggaaaatgtactgaagaagaaagaggaagaaacagaagcagaaaaataa
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