Sinomicrobium kalidii: LS482_06660
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Entry
LS482_06660 CDS
T07760
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh03030
DNA replication
sinh03410
Base excision repair
sinh03420
Nucleotide excision repair
sinh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LS482_06660 (polA)
03410 Base excision repair
LS482_06660 (polA)
03420 Nucleotide excision repair
LS482_06660 (polA)
03440 Homologous recombination
LS482_06660 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinh03032
]
LS482_06660 (polA)
03400 DNA repair and recombination proteins [BR:
sinh03400
]
LS482_06660 (polA)
Enzymes [BR:
sinh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LS482_06660 (polA)
DNA replication proteins [BR:
sinh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LS482_06660 (polA)
DNA repair and recombination proteins [BR:
sinh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LS482_06660 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LS482_06660 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Pro-kuma_activ
Motif
Other DBs
NCBI-ProteinID:
UGU17548
LinkDB
All DBs
Position
1646789..1649623
Genome browser
AA seq
944 aa
AA seq
DB search
MSDQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFTNSLLDVIKREKPDHLAV
AFDKGGSVARTEMFEAYKANRDETPEAIRIAIPYIQEILKAMHIPVIEKEGFEADDIIGT
LAKQAEKEGYQTYMVTPDKDFAQLVSENIFMYRPARMGNGIEIWGIPEVQKKFEVEKPEQ
VIDYLGMMGDSVDNIPGFPGVGDKTAKKFLKEFGSVENLIANVDSLKGKMKEKIKDNTEQ
GLLSKKLARIMLDVPVEFHEQDFELNTPDFEKVKEIFRELEFRRLTENLMKTFGQESSVE
TSAADGKASGSKTAKAQENVQFDLFGSPAEETGTTTTTSAYKTIETTPHHYQYVNTPLGR
KLLLEKLMLQKSVCFDTETTSIKSLEAELVGISFSWEPGKGYYVIFPEDQEETTSILEEF
RPFFEAEGIEKIGQNLKYDIKVLSNYNIRVKGKLFDTMIAHYLINPDMRHNMDVLAETYL
KYQPVPIETLIGKKGKNQKSMRTVALEKQTEYGVEDSDITLQLKLLFEGELPNRNALKLF
EEIEAPLVQILADMEIEGIRVNTDFLKSLSEALDKDIKGLEKSIYEQAGEEFNLASPKQL
GPILFEKLKLVNKPKKTKTGQYSTAEDVLSYLAKDHKIVEDILMWRQLQKLQNTYVDALP
NEINPKTNRVHTVYSQAVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIPRNEDYILLAA
DYSQIELRIIAALSEEENMIKAFRDGEDIHASTAARVFGVPLEEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTTLSRSEAKELIDTYYKTYPKLRAYINNQVHFAQDHGYVETILGRRRY
LPDINSRNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLREGDFKTKMLLQVHDEL
VFDACKAELDTIKPLIKSEMENAYKLVIPLDVEIGLGEDWLAAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcagaaacgcctttttcttttggatgcctacgccctgatattccggggatat
tatgcatttatcaaaaaccccaggataaattccaagggcatggacacctcggccatcatg
gggtttaccaactccctgctggacgtgataaagcgcgaaaaacccgatcatcttgccgtt
gcctttgacaagggaggttctgtggcacgcaccgaaatgttcgaggcctacaaggccaac
cgggacgaaaccccggaagcgatccggatcgctattccgtatattcaggaaatcctaaag
gccatgcatatcccggtcatcgaaaaggaaggtttcgaagcagatgacattatcggcacc
ctggccaaacaggccgaaaaagagggataccagacctatatggtcacgcccgacaaggat
tttgcacagttagtgtccgaaaacatttttatgtaccgcccggcaagaatgggaaatggc
atcgaaatatggggaataccggaagtacagaagaagtttgaagtggaaaaaccggaacag
gtaatcgactatctcgggatgatgggagattcggtagataacattcccggttttcccgga
gtgggcgataagacagcaaaaaaattccttaaggaattcggaagcgtagagaacctcatt
gccaatgtcgacagcctcaagggcaagatgaaagaaaagataaaggacaatacggaacag
ggacttttgtccaagaaactggcccggatcatgcttgatgttcccgtggaatttcacgaa
caggactttgagctgaacacccccgatttcgaaaaagtcaaggaaattttccgagaactg
gaattccgtcgccttaccgaaaacctaatgaagaccttcggacaggaaagttccgtcgag
acttccgctgccgatggcaaggcctccggttcaaaaaccgcaaaggcacaggaaaacgta
caattcgatctgttcggctctcctgccgaagaaacgggcactacgacaacaacctcggca
tacaagactatcgaaaccaccccacaccattaccaatatgttaacactcccctcgggcgg
aaattgctgctggaaaaactcatgctgcaaaaaagcgtgtgttttgatacggaaacgacc
agcataaaatcactggaagccgaacttgtggggatttcgttttcatgggagccgggaaaa
ggttattacgtcatttttcccgaagaccaggaagaaacaacctccatactggaagaattc
cgccctttcttcgaagcggaagggatcgaaaagataggtcagaacctgaaatacgacatc
aaggtactttccaattacaatatccgtgtgaagggaaaactgttcgacaccatgatcgcc
cattacctcatcaaccccgatatgaggcacaatatggacgtactggcggaaacctacctg
aaataccaacctgttcccatagaaacccttatcggtaaaaaagggaaaaaccagaaatcc
atgcgaaccgtagccctggaaaaacaaacggaatacggcgtggaagattcagacattacc
ctacaactcaaactcctgttcgagggcgaacttcccaaccgcaacgccctgaaattgttt
gaggagatcgaagctcccctggttcagattcttgccgatatggaaatcgaaggtatccgg
gtgaacacggatttcctgaaatcgctttccgaagccctggacaaggatataaagggattg
gaaaaaagcatttatgaacaggccggtgaagaattcaacctggcctctccaaaacaactc
ggtcccatcctcttcgaaaaactgaaactggtcaataaacccaaaaagaccaaaaccgga
cagtattccaccgccgaagatgtattgtcttatctggccaaggaccacaagatcgtggaa
gacatcctgatgtggcggcaattgcagaaattgcagaacacctatgtagatgccctcccc
aatgagatcaacccgaaaacgaaccgtgtccatacggtatacagccaggccgtagcagct
acgggaaggctgagcagtaacaacccaaacctgcaaaacatccccatacgcaccgaaagg
ggacggcaaatacgcaaggcgtttatcccaagaaacgaagattacatccttcttgcagcc
gactattcgcaaatagaactccggatcattgcggcactcagtgaagaagaaaacatgatc
aaggccttcagggatggggaagatattcacgcttccaccgcggcaagggttttcggggta
ccgctggaagaagtgacaagggaacagcgaagcaatgccaaaaccgtgaatttcgggatc
atttacggggtttccgccttcgggctgagcaaccagaccacactttccagaagcgaggcc
aaggaactcatagacacctattacaaaacctacccgaaactgcgggcatatatcaacaac
caggtccattttgcccaggatcacggttatgtggaaaccatactcggcagaagacgctat
ctgccggacatcaactcccggaaccaggtggttcgcggtgctgccgaacgaaacgcggta
aacgcccctatacagggaagtgctgccgatatcattaaaatagccatgatcaacatccac
aaaaagctccgggaaggagatttcaagaccaaaatgttactccaggtacatgacgaactg
gtctttgacgcctgcaaagccgaacttgacaccataaaaccgcttataaaatctgaaatg
gaaaatgcatataagctggttattcccctcgatgtggagatcggacttggcgaagattgg
ctggcggcacattaa
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