Sinomicrobium kalidii: LS482_07895
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Entry
LS482_07895 CDS
T07760
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh03030
DNA replication
sinh03430
Mismatch repair
sinh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LS482_07895 (dnaE)
03430 Mismatch repair
LS482_07895 (dnaE)
03440 Homologous recombination
LS482_07895 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinh03032
]
LS482_07895 (dnaE)
03400 DNA repair and recombination proteins [BR:
sinh03400
]
LS482_07895 (dnaE)
Enzymes [BR:
sinh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LS482_07895 (dnaE)
DNA replication proteins [BR:
sinh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LS482_07895 (dnaE)
DNA repair and recombination proteins [BR:
sinh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LS482_07895 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UGU17789
LinkDB
All DBs
Position
complement(1987517..1991899)
Genome browser
AA seq
1460 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPLSDTDNWPRCVQIAWQLHDEMGELVEQGDCLVKPEGFNIPF
DAERVHGISTELAAEEGVALREMLEKFNVALGKTKFIVGQNVGFDVNIMGCEFYREGMES
PLTSLPVLDTCTETTAEFCRLPGGRGGKFKLPTLTELHEKLFGEPFAEAHNATADVEATT
RCFFELIRIGEGFTEEELDVLPGYFEKFREHNPKEIPLIGLEHINLKAASDAIRKRIEKA
QGEDISRQELEENKQELKKMDFVHLHNHTQFSVLQATSSFPDLVAAAVREKMPAVALTDH
ANMMGAFHFVREIGNHNKAAKAKNEEALEKGEAPSEIEIKPIVGCEFYVCEDRLNKSRKD
NGYQIVMLAKNKNGYHNLAKMSSVAYTEGFYYVPRIDRETVQKYKEDVIVLTGNLYGEVP
GKILNVGENQAEEALLWWKEQFGDDLYIELMRHGQEDEDRVNNVLVQFARKHDVKMVATN
NTFYITKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSAEEMKSLFADLP
EAISNIQEVVDKIEPYELARDVLLPKFTIPEEFRDEEDQRDGGKRGENAYLRHLTYEGAR
GRYPEITDEIRERLDFELSVIERTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVA
YCLGITNLDPIAYDLLFERFLNPDRVSMPDIDIDFDDEGRSKVMDYVIDKYGANQVAQII
TYGTMAAKSSIRDTARVLDLPLGDADRIAKLIPNMKLAKIFSLDDNKLKGSLRSDELLKV
NELKNLAEGTDLEAETIRQARVLEGSLRNTGIHACGVIITPDDITNFVPVSIAKDSDLYV
TQFDNSVVENAGLLKMDFLGLKTLTLIKDTVKLVKYKHGIDLNPDEFPLDDEKTYELFQR
GETVGIFQYESPGMQKYMKELKPTVFADLIAMNALYRPGPLEYIPSFINRKHGKEEITYD
LPAMEEYLQETYGITVYQEQVMLLSQKLAGFSKGEADVLRKAMGKKIFALLAQLKPKFLD
GGEKNGHSRETLEKIWKDWEAFASYAFNKSHSTCYAWIGYQTAYLKANYPAEYMAAVLSN
NMNDIKSVSFFLEECKRMGLDVLGPDVNESFYKFTVNNNNAIRFGMGAIKGVGRGAVETI
VEHRESGAYKSVFDLAKRIDLRTANKKAFENLALAGGFDSFTETHRAQYFHDEGDGIVFL
EKVMRYAAKYQENKNSSQVSLFGEASEVQIPEPVVPPCEEWGTMEKLRREKEVVGIYISG
HPLDDFKTEMQYFCNGSIGLLNELENYTNRELSLAGVITDVQHRTSKNGKGWGIFMVEDY
TDSYEFKIFGEEYLKFRHFLMVNSFIYMKVFVREGWVNRDTGQKGDPRLQYNNMQLLQDV
METYAKRLTIHLSIDDVGDDKIQVLKDIIKQHKGDHALSFTVYKLDEKLKLHMPSRKKKV
KISNELLTELRERDIVYKLN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttattttcgataccgagaccaccggattgccgaaacgctgggatgcaccgctg
agcgataccgataactggccccgctgtgtgcagatcgcatggcagttgcacgatgagatg
ggagaacttgtagagcagggagactgcctggtaaaaccggaaggtttcaatattcctttt
gacgcggaacgggtacacggtatttctaccgaactggcagcagaagaaggtgtagcgctg
agggaaatgctggagaaattcaatgtcgccctgggcaaaaccaaatttattgtggggcag
aatgtcgggtttgacgtgaatatcatggggtgtgaattttaccgggaagggatggaatcg
ccgctcacttccctgccggtactggatacctgtacggaaacaacggcagaattctgccgg
ttacccggaggtcggggaggaaagttcaagctgcctacccttaccgaattgcacgaaaaa
ttattcggtgaaccttttgccgaggcccacaatgccacggccgatgtggaggctacaacc
cggtgtttctttgagttgatacgtattggtgaaggctttacggaagaagagctggatgtc
cttcccgggtattttgagaaattcagggagcacaatccgaaggaaataccgcttataggc
ctggagcatattaacctgaaagccgcttcggatgccatacgcaaaaggatagagaaagcg
cagggcgaagacatatccaggcaggaactggaagagaacaaacaggagctcaaaaagatg
gattttgtccatctgcacaatcacacacagttttctgtgttgcaggccacatcgagtttc
cccgacctggtggctgccgcagtaagagaaaaaatgccggcagtggcgcttaccgaccac
gctaacatgatgggagcttttcactttgtcagggaaatcgggaaccacaacaaggcggca
aaggcaaaaaacgaagaagccttggaaaaaggggaagcgccttccgagatcgagatcaaa
cctattgtgggatgcgagttttatgtttgtgaagatcgcctgaacaagagccgcaaggac
aacgggtaccagattgtgatgctggcgaagaacaagaacggatatcacaacctggccaaa
atgtcttccgtagcctataccgaagggttttattatgtgccgcgcatagaccgggaaacg
gttcagaaatataaggaagacgttattgtccttaccgggaacctgtatggtgaagtcccg
ggaaaaatactcaatgtcggtgaaaaccaggcggaagaagccctgttgtggtggaaagaa
cagttcggcgacgatctctatatcgaactgatgcggcacggacaggaagacgaggacagg
gtcaacaatgtgctggtgcagtttgccaggaagcacgatgtgaagatggtggccaccaat
aacaccttttatatcaccaaggaagatgccaatgcccacgatattctcctttgtgtaaaa
gacggcgaaaaacaggccactcccatcggaagggggcgcggctatcgttacggcctgccg
aaccaggaatattacttcaagtcggccgaggagatgaagtcactttttgccgacttgccc
gaagccatttccaatatccaggaagtggtggataaaatagagccctatgaactggcgagg
gatgttcttcttcccaagtttaccataccggaagaattccgggacgaagaagatcagcgt
gacggcggaaaacggggcgagaatgcgtatttgcggcacctcacctatgaaggggccagg
gggagatatccggaaatcaccgatgagatccgggagcgcctcgattttgagttgagtgtt
attgagcgtaccgggtacccgggttacttcctgattgtgcaggattttatcgccgccgca
agggagatgggggtttccgtagggcccggtcgcggatcggcagcaggatcggccgtggcc
tattgccttgggattacgaatctcgatcccatagcgtacgacctcctttttgagcgtttc
ctcaatccggaccgggtgtccatgcccgatatcgatatcgactttgacgacgaaggccgg
agcaaggtaatggattacgtgatcgataagtacggggccaaccaggtggcgcagatcatt
acttacggtaccatggcggcgaagtcctctatccgggataccgcccgtgtactggacctg
cccctgggcgatgccgaccgtatagccaagcttatccccaacatgaagctggccaagata
ttttcactcgacgataacaagctgaaaggtagccttcgttccgatgagcttttaaaggtc
aacgaactgaaaaacctggcagaaggaacagacctggaagccgagaccatcaggcaggcc
cgggtgctggaggggtctttgcggaatacgggaattcacgcttgcggggtaattatcacc
ccggatgatattaccaacttcgtgcccgtgtccatagccaaggattccgatctttacgtg
acccagttcgacaactcggtggtggaaaatgccgggttgctgaaaatggactttctgggg
ctcaagacgctgacccttatcaaggataccgtaaaactggtcaagtacaagcacgggata
gacctgaaccccgatgaattcccgctcgacgatgagaagacctatgagctctttcagcgc
ggggaaacggtagggatattccagtacgaatcccccgggatgcagaagtacatgaaagag
ctgaagccgacggtctttgccgacctcattgccatgaatgcactgtaccgtccggggcct
cttgaatatatccccagttttatcaaccggaagcacggcaaggaagagatcacttacgat
ctgcctgcgatggaagaatacctccaggaaacctacgggattaccgtataccaggagcag
gtgatgctgctttcccagaaactggccgggttcagtaaaggtgaagccgatgtgttgcgg
aaagccatggggaaaaagatatttgccctgctggcacaattaaaaccaaagttcctggac
ggcggggagaaaaacggccatagcagggaaaccctggaaaaaatctggaaggactgggag
gcttttgcaagttatgccttcaacaaaagtcactctacctgttatgcgtggatcgggtac
cagaccgcctatctgaaggccaactatcctgcggaatatatggcggcagtgttgtccaac
aacatgaacgatataaaatcggtttccttttttctggaagaatgtaaacgtatggggctt
gatgtactcggaccggacgttaacgagtctttttataagtttaccgtgaacaacaacaat
gccatacgttttggtatgggggccataaaaggcgtgggaagaggtgccgtagagaccatt
gtggagcacagggagtccggagcatacaaatcggtgttcgatctggccaaacggatagat
cttcgcacggccaataaaaaggcctttgaaaaccttgcccttgcaggagggttcgattct
tttacggaaacccaccgggcccagtattttcacgatgagggcgatggtattgtgttcctt
gaaaaggtgatgcggtatgccgccaaataccaggaaaacaagaattcttcacaggtgagc
ctcttcggggaagccagtgaggtgcagatacccgagccggtggtgcccccgtgtgaggag
tggggtaccatggaaaaactccgcagggaaaaagaagtggtgggcatctatatctccggg
catccgctggacgattttaagaccgaaatgcaatatttctgtaatggcagcatcggcctg
cttaacgaactggaaaattataccaacagggaattgtccctggcaggggtgattaccgat
gtacaacaccgtacttccaagaacggcaaggggtggggcatttttatggtggaagactat
acggattcgtatgagtttaagatattcggcgaggaatatctcaagttcagacattttctc
atggtcaactcttttatttacatgaaagtgtttgtaagggaaggctgggtgaacagggat
accggccaaaaaggcgacccccgtttgcagtacaacaacatgcagctgctgcaggatgta
atggaaacctatgccaaaaggcttaccattcacctgagtattgatgatgtaggagacgat
aaaatacaggtgctgaaagatattataaaacaacacaagggcgatcatgccctgagtttt
acggtatataagctggacgaaaaactaaagctccatatgcccagccgtaaaaagaaagta
aaaatttccaacgaacttcttaccgaactgagggaaagggatatcgtgtataaactgaat
tag
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integrated database retrieval system
