Sinomicrobium kalidii: LS482_12820
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Entry
LS482_12820 CDS
T07760
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LS482_12820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinh03021
]
LS482_12820
03400 DNA repair and recombination proteins [BR:
sinh03400
]
LS482_12820
Enzymes [BR:
sinh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LS482_12820
Transcription machinery [BR:
sinh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LS482_12820
DNA repair and recombination proteins [BR:
sinh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LS482_12820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Fungal_KA1
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
UGU14578
LinkDB
All DBs
Position
3188148..3189140
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSSDFEGKFEFRPLEPGYGLTVGNALRRVLLASLDGFAITSVKIE
GVEHEFSTISGVVEDVTEIILNLKQVRFKRQIDDVENETVSVSITGKEQLTAGDFQKFIS
GFQVLNPDLVICNMEPNVNINLELTIEKGRGYVPAEENKKPNVPIGTIFTDSIFTPIKNV
KYSIENFRVEQKTDYEKLVFEIVTDGSIHPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVSVKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattcaattttcaaaagcccgataaagttataatgatcgattcttccgatttc
gaaggaaaatttgaatttcgtcctttggaacccggatacggattgaccgttggtaacgca
ttacgaagagttttgctggcttcgttagatggttttgctattacatcggtgaagatagaa
ggcgtggagcacgaattctccaccatatccggtgtagtagaagacgttacggagatcatc
ctgaatttaaaacaagttcgttttaaaaggcagattgacgatgtggagaatgaaaccgtt
tccgtctccattaccggtaaagaacagctcacggcaggggattttcagaaattcatttcc
ggctttcaggtgctgaacccggatctggtgatctgcaatatggagcccaatgttaatatc
aatctggaactgaccatagagaaaggaagaggttatgttccggctgaagaaaacaaaaag
cccaacgtacctataggaactatctttacggattctatctttacacccatcaagaatgta
aagtatagcatagaaaactttcgtgtggaacagaaaaccgattatgaaaaactggttttt
gaaattgtcaccgatggttccatacatccgaaagatgccctgacagaagcggccaagata
ctgatccatcacttcatgctgttctccgatgagcggataaccctcgaagctgatgaaatt
gcacagacggaaacctatgacgaagagtcgctccatatgaggcagttgctcaaaaccaag
ctggtggacatggacctgtcagtccgtgcactgaactgcctgaaagcggcggaggtggat
acgctgggcgatctggtatccttcaacaagaacgatttgatgaagttccggaactttggt
aaaaaatccctgacagaactggaagaactcgtaagtgtgaaagggttgagtttcggtatg
gatctatcaaaatataaattagataaagattaa
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