Sinomicrobium kalidii: LS482_14390
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Entry
LS482_14390 CDS
T07760
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh00470
D-Amino acid metabolism
sinh00550
Peptidoglycan biosynthesis
sinh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LS482_14390 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LS482_14390 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinh01011
]
LS482_14390 (murD)
Enzymes [BR:
sinh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LS482_14390 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sinh01011
]
Precursor biosynthesis
Amino acid ligase
LS482_14390 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
DUF6558
PGK
Pyr_redox_3
ribosomal_L24
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
UGU14878
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All DBs
Position
3551308..3552687
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AA seq
459 aa
AA seq
DB search
MTDAQGQGAGDSGRKKSRLVVLGGGESGIGTAILGKKEGFDVFVTDKGAIKEKYRNVLIQ
YGIAWEEGRHSTERIYDADVVMKSPGIPDTVSVVKELKERKVPVISEIEFAAGYTGARLI
GITGSNGKTTTTMLAYHLLKNGGLDVGMAGNIGDSFAQMVAGDDKEYFVLEISSFQLDGI
VTFRPEIAVITNITPDHLDRYDYKFENYIASKFRIAMNQTAEDYLIYDADDEVITDWLAR
HPVPSKLLPFSVEKQVANGAYLKEDKIIITIDNDQITMSTDTLTLEGKHNMKNTMAASLV
AQLVKVRKKTIRESLENFQGVEHRLEKVLKIQNVQYINDSKATNVNAVLYALDSMTAPTV
WIVGGEDKGNDYAVLMPLVREKVKAIICLGLDNTKIIDAFGKVVDLMVETQAMEEAVKIA
YKIAEKGDNVLLSPACASFDLFKNYEDRGNQFKEAVKRL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgcacaaggacagggagccggggacagcggaagaaaaaaatccaggctggtg
gtactgggaggaggagaaagcggaataggcacagcaatactgggcaaaaaagaaggcttt
gatgtctttgtgactgataaaggagcaattaaggaaaaatacaggaatgttcttatacaa
tacggaatagcatgggaagaaggaaggcatagtacggaaagaatttacgatgccgatgtg
gttatgaaaagtccgggaatacccgatacggtgtccgtagtaaaagaattgaaggaacga
aaggtcccggtaatttccgaaatagagtttgcagccggatatactggtgcacgtttgatc
ggaattacgggaagtaacggcaaaacaaccactaccatgctggcctaccacctgctgaag
aatggcggacttgatgtggggatggcaggaaacatcggagacagttttgcgcagatggta
gccggggatgacaaggaatatttcgtactggaaataagcagctttcagttggacgggatt
gtgacattccggccggaaatagcggtgatcaccaacatcactcccgatcatctggacagg
tatgactataaattcgaaaattatatagcctccaagttccggatagcgatgaaccagacc
gcggaagattaccttatttatgacgcggatgatgaagtgataaccgattggcttgccagg
catcccgttccgtcaaagctgttgcctttttccgtagagaagcaggtggccaacggagcg
tatttaaaagaagataaaataataataacaatagataacgatcagataactatgtccaca
gacacattaacattggaagggaagcacaacatgaagaataccatggcagcttccctcgtt
gcccagctggtaaaagtgaggaaaaaaaccatccgggaaagtctggaaaacttccaggga
gtggagcaccgcctcgaaaaggtgctgaaaatacagaatgtgcagtacattaacgattcc
aaggccactaatgtaaacgcagtgctttacgctttggacagtatgacggcccctaccgta
tggatcgtgggaggtgaggacaaaggaaatgactatgccgtgttgatgcccctcgtaaga
gaaaaggtgaaagccataatctgcctggggctggacaacaccaagattatagatgctttt
ggtaaagtggtagatcttatggtggaaacccaggctatggaagaggcggtgaaaatagcg
tacaagatcgcagagaaaggcgataatgttttgctttcacctgcatgcgccagctttgac
ctgtttaaaaattatgaagacagagggaatcagttcaaggaagcggtaaagcggctgtaa
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