KEGG   Sinomicrobium kalidii: LS482_15455
Entry
LS482_15455       CDS       T07760                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sinh  Sinomicrobium kalidii
Pathway
sinh03030  DNA replication
sinh03430  Mismatch repair
sinh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sinh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LS482_15455
   03430 Mismatch repair
    LS482_15455
   03440 Homologous recombination
    LS482_15455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sinh03032]
    LS482_15455
   03400 DNA repair and recombination proteins [BR:sinh03400]
    LS482_15455
Enzymes [BR:sinh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LS482_15455
DNA replication proteins [BR:sinh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LS482_15455
DNA repair and recombination proteins [BR:sinh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LS482_15455
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 DNA_pol_B_exo1 Rv2179c-like T4_Spackle
Other DBs
NCBI-ProteinID: UGU15070
LinkDB
Position
3808654..3809430
AA seq 258 aa
MELKLTRPICFFDLETTGTDVARDRIVEIAILKVYPNGNKESKTWLVNPEMPIPEHSTAI
HGITDEKVANEPTFKELSKDIYNMIKDSDLAGYNSNRFDIPLLAEEMLRAEVDFDMKNRL
AVDVQTIFHLMEKRTLEAAYRFYCDKDLTNAHSAEADTTATYEVLKSQLDRYSELENDIK
FLSEFTTRKQTADFAGYIILNEKDEEVFSFGKHKGKRVEDVLEKEPGYFGWLLNADFPLY
TKRVLTGIKLRKLNNKLS
NT seq 777 nt   +upstreamnt  +downstreamnt
atggaactcaaacttaccagacccatttgtttttttgacctggaaaccaccggaaccgat
gtggccagggacaggatcgtggagatcgccatcctgaaagtatatcccaacggcaacaag
gaaagtaagacctggttggtaaatccggagatgcccataccggagcattcgacagccatc
cacggcattaccgatgaaaaagtggccaatgaacccacgtttaaggaattgtcgaaagat
atttacaacatgatcaaggacagtgacctggccggttacaattccaacaggttcgacata
ccgttactggcagaggaaatgttgcgggccgaggtggacttcgatatgaaaaaccgcctg
gccgtggatgtgcagactatttttcaccttatggaaaaacggaccctggaagcggcgtac
aggttttactgcgataaagacctgaccaacgctcattctgcggaagccgataccacagct
acctacgaagtgctgaaatcgcaactggacaggtatagtgaactggaaaatgatatcaag
ttcctctccgaatttaccaccaggaagcaaaccgccgattttgccgggtatatcatattg
aatgaaaaagatgaagaagtcttctcctttggcaaacacaaaggaaaacgtgtagaagat
gtgcttgaaaaagaaccgggatatttcggctggttgctcaatgccgattttccactctat
accaagagggtgcttaccggcatcaaacttcggaaactcaacaataaactctcgtag

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