Sinomicrobium kalidii: LS482_21165
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Entry
LS482_21165 CDS
T07760
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
sinh
Sinomicrobium kalidii
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinh03009
]
LS482_21165 (rimK)
Ribosome biogenesis [BR:
sinh03009
]
Prokaryotic type
ribosomal protein modification factors
LS482_21165 (rimK)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Zn_protease
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
D123
TTL
Motif
Other DBs
NCBI-ProteinID:
UGU16174
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Position
5243864..5245240
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AA seq
458 aa
AA seq
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MIENKTIVGSEEWVALPQLEIPAIKVRVDSGAKTSALHAVNINPFQRNNETWVTFEVFPI
QNNGKKLIHCEALVTDKRVVKSSTGTRENRYVIKTSLHVNGSSWDIELTLTNRDSMGYRM
LLGREAMIGRMLVDPESSFQLGELSDEDVESTYKLKSNSANGLKIGLLASNPDLYSNRRI
IEAGERMGHDMQFFNIRQCYMKLDAKTPEIHYRGGKILNELDAIIPRIRPAMTYYGCSLT
WQFESLGIFSLNSATAISQSRDKLFSLQLLLNNGIDIPTTGFANSPLDTNDLIKMVGGSP
LIIKLLEGTQGKGVVLAETKKAAESVINAFKSLNAYILVQEFIKEANGKDIRCFVIDGKV
VAAMQREAPPGEFRANMHLGGTASLIKVTAAEKRMAVKASKAMGLRVAGVDIIRSSKGPL
LLEVNSSPGLEGIETATDKDVASLMIRSIEKQLKYHPQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaacaaaaccatagtaggcagtgaagaatgggttgcactgccccagctcgaa
attccggccataaaagtacgtgtggacagcggagcaaaaacttctgccctgcatgccgtg
aatattaacccgtttcagcgaaacaacgaaacctgggttacctttgaggtgttccccata
cagaacaacggcaaaaaactgattcactgcgaagcactggttaccgacaagcgcgtggta
aaaagttccacgggaacccgtgaaaacaggtatgtcataaaaacttcactacatgtaaac
ggatcgtcatgggatattgaacttaccctgaccaacagggacagcatgggctaccgcatg
cttctcgggcgggaagccatgataggccgtatgcttgtagatcccgaaagcagtttccag
ctcggggaattgtctgatgaggatgtggaaagcacctataaactaaagtcaaacagtgcc
aacggactgaaaatcgggctgcttgccagcaatcccgatctttacagtaaccgcaggatc
atagaagccggagaacgcatggggcatgacatgcagttttttaatatccgccaatgctat
atgaaactggacgccaaaacccctgaaatacattaccggggaggtaaaatattaaatgaa
ctggatgccataattccgcgtatccgtcctgcaatgacctattacggctgctcgcttaca
tggcagttcgaatctctcggaatattcagtctgaacagtgccaccgccataagccagtcc
agggacaagttgttttcactgcaactcctcctcaataacggaatcgatatccccactacc
ggatttgccaattcccctctggacaccaacgaccttataaaaatggtaggcggttcccca
ttgatcatcaaactcctcgaagggacccagggcaaaggcgtggttctggcagagaccaag
aaagctgcggaaagtgttattaatgcctttaaaagcctgaatgcctatatcctggtacag
gaatttatcaaagaggccaacggaaaggacatccggtgttttgtgatagacgggaaggta
gtggccgcaatgcagcgggaagctcctcccggagaattccgtgccaacatgcacctgggc
ggcacggcttccctgatcaaggttacggccgcggaaaaaaggatggcggtaaaagcgtct
aaagccatggggctccgggttgcaggggtggatattatccgttcttccaaaggtcctttg
ctgctggaggtaaattcctctcccgggctcgaaggtattgaaacggctactgataaagat
gtggcttcattgatgatcagatctattgaaaaacagttaaaataccatccgcagtaa
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