Sinimarinibacterium sp. NLF-5-8: GT972_00335
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Entry
GT972_00335 CDS
T06400
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT972_00335 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sini03019
]
GT972_00335 (groL)
03110 Chaperones and folding catalysts [BR:
sini03110
]
GT972_00335 (groL)
03029 Mitochondrial biogenesis [BR:
sini03029
]
GT972_00335 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sini04147
]
GT972_00335 (groL)
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GT972_00335 (groL)
Messenger RNA biogenesis [BR:
sini03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GT972_00335 (groL)
Chaperones and folding catalysts [BR:
sini03110
]
Heat shock proteins
HSP60 / Chaperonin
GT972_00335 (groL)
Mitochondrial biogenesis [BR:
sini03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GT972_00335 (groL)
Exosome [BR:
sini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GT972_00335 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GT972_00335 (groL)
Exosomal proteins of breast cancer cells
GT972_00335 (groL)
Exosomal proteins of colorectal cancer cells
GT972_00335 (groL)
Exosomal proteins of bladder cancer cells
GT972_00335 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
QHS08736
LinkDB
All DBs
Position
63978..65621
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKEVKFGDDARARMVAGVNVLANAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQLVKEVSSKTSDEAGDGTTTATVLAQAIVNEGLKSVTAGVDPMEIKRGI
DKAVEAVTAELKKVSKPCKDRKAIAQVGTVSANSDHSIGERIAEAMDKVGKEGVITVEDG
SGLNDELDVVEGMQFDRGYLSPYFINNAQSQQVELDNPLILITEKKISNIREMLPILEGV
AKQGKPLLIIAEDVEGEALATLVVNNLRGILKVAAVKAPGFGDRRKEMLKDIAILTGGQV
ISEDLGLSLEKVDVADLGTAKKVQIDKENTTVIDGAGKKDKIQTRIKEIRAQVDSATSDY
DREKLQERLAKLSGGVAVIKVGAATEVAMKEKKARVEDALHATRAAVEEGIVAGGGTALI
RAQKVLDSLKLTSAEQQVGVSILRRAIEEPLRQIVRNAGEEPSVVVNKVREGKGAFGYNA
GANEFVDMIEAGIIDPAKVTRLALQNAASVAGLMLTTEAMIAEAPKKDEAPMMPPGGMDG
MGGMGGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaaagaagtgaaatttggtgatgacgcccgcgcccgcatggtggccggcgtc
aatgttttggccaacgcggttaaagtcaccctggggcccaagggccgcaacgtggtgctg
gataagtcttttggtgcgccgaccgtgaccaaagacggtgtttccgtggccaaggaaatc
gaactcaaagacaagtttgaaaacatgggcgcgcagctggtcaaggaagtgtcttccaag
acctctgatgaagccggcgacggcaccaccaccgccaccgttttggcacaagccattgtt
aacgagggcctgaagtcggtgaccgccggcgttgacccgatggaaatcaagcgcggtatc
gacaaggcggttgaagctgtcaccgccgagctgaaaaaagtctccaagccttgcaaggat
cgcaaagccattgcccaggtcggcaccgtgtccgccaacagcgatcactccattggcgag
cgcattgccgaagccatggacaaagtgggcaaagaaggcgttatcactgttgaagacggc
tccggcttgaatgatgagctggacgtggtggaaggcatgcagtttgatcgcggctacctg
tcgccgtacttcatcaacaacgcgcaaagccagcaagtggagctggacaacccgctgatc
ctcatcaccgagaagaaaatcagcaacatccgcgaaatgctgccgatcctcgaaggcgtg
gccaagcagggcaagccgctgctgatcatcgctgaagacgttgaaggcgaagcgctggcc
accctggtggtcaacaacctgcgcggtattctcaaggttgctgcggtcaaagcgcctggc
tttggcgaccgtcgcaaggaaatgctcaaggacatcgccattctcaccggcggccaggtg
atttctgaagatctgggtctgtcgcttgaaaaagtggatgtggccgatctcggcaccgcc
aagaaagtgcagatcgacaaggaaaacaccaccgtcatcgacggcgcgggcaagaaggac
aagatccagacccgcatcaaggaaatccgcgcccaagtggacagcgccacctccgattac
gaccgcgaaaaattgcaagaacgtctggccaagctgtctggcggcgttgccgtgatcaaa
gtcggtgccgccaccgaagtggcaatgaaagagaaaaaagcgcgcgttgaagacgctctg
cacgccacccgtgcagccgttgaagaaggcattgtggctggcggcggtaccgcgctgatc
cgtgcacagaaagtgctcgacagcctcaagctgaccagtgctgagcagcaagtgggcgtc
agcatcctgcgccgtgcgattgaagagccgctgcgccagatcgttcgcaacgccggtgaa
gagccgtcggttgtggtcaacaaggttcgtgaaggcaagggcgcgttcggttacaacgcc
ggtgccaacgagtttgtcgacatgatcgaagccggcatcatcgacccggccaaggtcacc
cgtctggcgctgcaaaacgccgcctcggttgccggcctgatgctgaccactgaagcgatg
attgccgaagcgccgaagaaggatgaggcgccgatgatgcctccgggcggcatggatggc
atgggtggcatgggcggtttctga
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