Sinimarinibacterium sp. NLF-5-8: GT972_00640
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Entry
GT972_00640 CDS
T06400
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT972_00640 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sini03019
]
GT972_00640 (recQ)
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_00640 (recQ)
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT972_00640 (recQ)
Messenger RNA biogenesis [BR:
sini03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GT972_00640 (recQ)
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GT972_00640 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
AHJR-like
Motif
Other DBs
NCBI-ProteinID:
QHS08790
UniProt:
A0A6P1U5E8
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All DBs
Position
complement(124171..126015)
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AA seq
614 aa
AA seq
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MSPSVLDALKRQFGFERFRPGQQGIVEAALEGRDLLAIMPTGGGKSLCFQLPAVLSPGVT
VVVSPLIALMQDQVRLLDAMGIPATFLNSTLDGRQTAERCQALMRGQVKLLYVAPERLLL
PEFLNGFLRDLDQQVGLTALVIDEAHCVSEWGHDFRPEYRQLAAVRARFEHLPCWAFTAT
ATERVRSDIIEQLALHEAFTHVASFERSNLHYAVRSKDKHTYAELLNQARGGESGIIYCL
SRKGVEELAERLQADGVNALPYHAGLAANIRREHQDRYIRDDAQIIVATNAFGMGINKPD
VRWVIHYGLPSTIEGYYQEAGRAGRDGEPARCTLYYALGDIRTAEFLIQKKIHPETGEPL
EEEQRVARQQLRQVIDYAESGECRRNIQLRYFGEQRSDPCGRCDNCCEPRPSADRTIAAQ
KLLSCIARLRQRNPGYGYGGLYVIDLLRGANTERIRKNGHTDLSTYGIGKDLTVEQWRII
LRSLLHQGLLTETQDGFPTLALNPQSHEVMRGKLRVHVVEPIAQPKPSKRTAPSQLSGDD
EALFEELRMLRKHLAETHSIAPYMVFSDASLRAMVRHKPQTLDDFARIPGVGERKLELYS
DDFIGLIHDYVVSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatcggtccttgacgcgctcaaacgccagtttgggtttgagcgctttcgcccc
ggccagcaaggcattgttgaagccgcgctagaaggccgtgatctgctggcgatcatgccc
accggtggcggcaaatcactgtgctttcaattgcccgcggtgctcagccccggcgtcacc
gtggtggtatcgccgctgattgcgctgatgcaggatcaggtgcgcctgctggatgccatg
ggcatccccgccacttttctgaactccacgctggatggccgccaaaccgccgagcgctgc
caggccttgatgcgcgggcaagtcaagctgctgtacgtcgcccctgaacggctgttgttg
ccggagtttttaaacggttttttgcgtgatctggatcagcaagtcggcctgaccgcgctg
gtgatcgacgaagcgcattgcgtctctgaatgggggcatgattttcgccctgaataccgt
cagctcgccgccgtgcgcgcgcgctttgaacacctgccgtgctgggcatttaccgccacc
gccaccgagcgcgtgcgcagcgacatcatcgagcaactggcgctgcacgaggcgtttacc
catgtcgccagctttgagcgcagcaatctgcactacgccgtgcgcagcaaggacaaacac
acttacgccgagctgctcaaccaggcgcgcggcggtgaatccgggatcatttactgcctg
tcgcgcaagggcgtagaagaactcgcggagcgcctgcaagccgatggcgtcaacgccctg
ccctatcacgccggtctggccgccaacatccgccgtgagcaccaggatcgctacatccgt
gacgatgcacaaatcatcgttgccaccaacgcctttggcatgggcatcaacaaacccgac
gtgcgctgggtgattcactacggcctgccatcgacgatcgaaggctattaccaggaagcc
ggccgcgccggacgcgacggcgaacccgcacgctgcacgctgtattacgctctgggcgac
atccgcactgctgagtttctgatccaaaaaaagattcatcccgaaaccggcgaacccctg
gaagaagaacagcgcgtcgcgcgccaacagctgcgtcaagtgattgattacgccgagtcg
ggcgagtgccgtcgcaacattcagctgcgttactttggcgaacagcgcagcgatccctgt
ggccgctgcgacaactgctgcgaaccgcgcccgtcggccgatcgcaccatcgccgcacaa
aagctgctgtcgtgcatcgcgcgcctgcgccagcgcaaccccggttatggctacggcggg
ttgtatgtgattgatctgctgcgcggtgccaacaccgagcgcatccgcaaaaacggccat
accgacctgagcacttacggcattggcaaagatttaaccgtggagcaatggcgcatcatc
ctgcgttctctgctgcatcaaggcttacttactgaaacgcaagacggctttccaacgctg
gcactgaacccgcaaagccatgaggtcatgcgcggaaaactgcgcgtgcatgtggtcgaa
ccgatcgcccagcccaaaccgtccaagcgtacggcaccgtcacaactcagcggagatgat
gaggcgctgtttgaagaactgcggatgctgcgcaaacacctggccgaaacccacagcatt
gcgccgtatatggtgttttccgatgccagcctgcgcgcgatggtgcggcacaagccgcaa
acgctggatgactttgcgcgcatccccggcgttggcgagcgcaagctggaactgtacagc
gatgatttcattggcctgattcacgattacgtcgtcagccaatag
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