Sinimarinibacterium sp. NLF-5-8: GT972_00965
Help
Entry
GT972_00965 CDS
T06400
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03420
Nucleotide excision repair
sini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT972_00965
03430 Mismatch repair
GT972_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_00965
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT972_00965
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT972_00965
MMR (mismatch excision repair)
Other MMR factors
GT972_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHS08849
UniProt:
A0A6P1U6B2
LinkDB
All DBs
Position
complement(193748..195487)
Genome browser
AA seq
579 aa
AA seq
DB search
MPDPQSPAEVASQRALDAMFRSLDAGEHFRLEAGAGAGKTYSLIKALHYLIERHKSTFPR
KNKQIACITFTNVARDEIAARTDRSPMVYCDTNHAFCWSLISGFQKQLRGLVEAMPAWQE
RIAEAGGGLGNRVIEYNFGHRSIREDRVSLHHDDVLPLTVSLMEHAKFRHIVTDRFPIIL
VDEYQDTDKDWVEAIQRLFLGNPPSPLFGFFGDHWQKIYGNGCGRLEHPQVKEIGKEANF
RSVKAIVDCLNRMRPELQQFVEDPDAIGQVSVFHTNAWTGGRQTGAHWGGDLPSEVGHDT
LEGVKASLTQEGWDFSPESTKVLMLTHRLLASEQGYASLPSVFRYNDSFAKKEHPYIAFF
VDQLEPACDAFSANRFGAMFDALGGNTPLLRSQADKAAWHDAMSQLLAIRENGTVGEVID
HLLNRRKPRLPEAIEKRERELREFDRASGEEMPAALAEIEKLRAVRYAEIKTLRSYLDGH
SPFETKHGVKGAEFENVLVVIGRGWNQYNFGEMLELAGSAAIPPGKQAAFERNRNLFYVA
CSRPKRRLALLFTQQLSPDAIATLERWFLPESIRAVAFS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatccgcagtcaccggccgaggttgccagccagcgcgctcttgatgccatgttt
cgcagcctggatgccggagagcacttccggctagaagctggagcaggcgctgggaagacc
tactccctcatcaaagcgctccactatttgatcgagcgccacaaaagcacatttccaagg
aaaaacaagcagattgcgtgcattacatttaccaatgtggcccgcgatgaaattgccgcc
cgtactgacagaagcccaatggtgtactgcgacaccaatcatgccttctgttggtcattg
atcagtggcttccagaaacaactccgtggtttggttgaggcgatgccggcatggcaagag
agaattgcggaagctggaggcggcctgggtaaccgtgtaatcgagtacaactttgggcac
cgctccattcgtgaagatcgcgtgtctctccatcacgatgatgtgttgcccctcactgtt
tcattgatggagcatgccaaatttaggcatatagtgacagatcggtttccaatcattctt
gtggatgaatatcaagataccgataaggattgggtcgaggcgattcagcggctgtttttg
gggaatccgccttcacccctattcggcttcttcggcgaccattggcagaagatatatggc
aatggatgcggaagacttgagcatccgcaagtcaaagagattggcaaggaagccaacttc
cgatcagtcaaagccattgttgactgcctcaaccggatgcgcccggagctacaacaattt
gtcgaagaccctgacgctattggacaggtcagcgtatttcatacaaatgcctggactgga
ggacgacaaaccggtgcccattggggaggagatttaccttcggaagtcggccacgacaca
cttgagggagtgaaggcctcgttgacacaagagggatgggatttttccccggaaagtaca
aaggtactcatgctgacgcataggcttcttgccagtgagcagggctatgccagcttgcca
tcagtctttcgttacaacgattcctttgccaagaaggaacatccgtatattgccttcttc
gtagaccagttggagcctgcgtgcgatgccttctccgcgaataggttcggcgccatgttc
gatgcgctgggcggtaacacgccgctattgcggagtcaggccgataaggcagcctggcac
gatgcgatgagccagctactggcgattcgcgaaaatggcacggtcggagaagtcatcgac
cacctgctcaaccggcggaagccaagactcccggaagccatcgagaagcgtgagcgggaa
ctacgcgagttcgatcgagcaagcggcgaagagatgccggccgcactggcggagatagag
aagctacgcgcggtcagatacgcagaaatcaaaacgctacggagctatctggatggtcac
tctccctttgaaaccaaacacggagtaaagggcgcggagttcgagaatgttcttgttgtc
atcggtcgcgggtggaaccagtacaactttggagagatgctcgaactggcaggaagcgca
gccatcccacccgggaagcaggcggccttcgagcgaaatcgaaacttgttctatgttgcc
tgctcaagaccgaaacgccgccttgccctgctgttcacacagcagctttcgccagatgcc
atcgcaacacttgaaaggtggttcttgccagagagcatccgtgctgtcgctttttcgtag
DBGET
integrated database retrieval system
