Sinimarinibacterium sp. NLF-5-8: GT972_01450
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Entry
GT972_01450 CDS
T06400
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
GT972_01450
Enzymes [BR:
sini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GT972_01450
Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GT972_01450
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
QHS08938
UniProt:
A0A6P1U318
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Position
complement(298837..300417)
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AA seq
526 aa
AA seq
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MLLTLRFVRPLQATLLALAGTVLPVNVQAQNSTTPESQFPRFAQLEPTVGFWKDVFYTYS
QNQIVLHASEYPAKVLRVLDLRGAAAVMSDIQFDHYRRDAEKTARAQMDALLKSVHDKRH
RPEQMTTEERRIFTLFSDVRADDRFAIARNTLRTQRGIRERTQVALETSQRYLPYMEQIF
ASYGLPKTLTRLPIVESSFNVDAYSRSHAAGVWQFIPTSAKHYMRLNEVVDDRRDPWTST
DGAARHLRDDYALLQDWPLAVTAYNHGRYGIQRGIAAINGRTLMDLINRGNHPRWGFAGK
NYYAEFLAAVDIERQWRQQQAADSALPPLKFEVVETRDYLPYTTLQRLSGGDETLFRKLN
PAYLPEVINGRLYVPPGHMIRVPAGHARNFQVAYNQLGSNERFSRQRQFYTLHTVRKGES
LGLIAKRNGTTIAALQHSNGIKGSVVRIGQVLKIPPRGVTVTPAVQVARNAPAKPAFRQH
RVQRGQTLSSIATRYDVSLTELRTANGLGHGNLIKVGQTLRVPARN
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttacgctgcgttttgttcgccccctgcaggccaccctgctggctctggccggt
accgtcctgcccgtgaatgtccaggctcagaattcaaccaccccggaaagccagtttccg
cgctttgcccagctcgaacccacggtcggcttctggaaggacgtgttttacacctactcc
caaaatcagatcgtattgcacgcctccgaatacccggccaaggttttgcgcgtgctggac
ctgcgtggcgccgccgccgtgatgagcgatatccagtttgaccactatcgtcgcgatgct
gaaaagaccgcgcgcgcgcaaatggatgccctgctcaagtcagttcacgacaaacggcac
cgccccgaacagatgaccaccgaggaacggcgcatcttcaccctgttttctgacgtgcgt
gcagatgatcgctttgccatagcccgcaacaccctgcgcacccagcgcggcatccgtgaa
cgcacccaggtggcactggaaacctcgcagcgctacctgccgtacatggagcagatcttt
gccagctacggcctgcccaagacgctgacgcgcctgccgatcgtggaatccagcttcaat
gtagacgcctactcgcgctcgcacgcagccggggtctggcaattcatccccacatcggcc
aagcactacatgcgcctgaacgaagtcgtcgatgatcgccgcgacccgtggacttcaacc
gacggcgccgcccgccacctgcgcgacgactacgcgctgctccaggactggccgctggcg
gtgacggcctacaaccatggccgctacggcattcagcgcggcatcgccgccatcaatggc
cgcacactgatggatctgatcaatcgcggcaatcacccacgctggggctttgccggcaaa
aattattacgccgaatttctggcagccgtcgatatcgagcgccagtggcgccagcagcag
gcggccgacagcgcactgccgccgctcaagttcgaagtggtggaaacccgcgactacctg
ccctacaccacgctccaacggctcagcggcggggatgaaaccctgttccgcaaactcaat
cccgcctacctgccagaagtcatcaacggcaggctctacgtcccgccggggcacatgatc
cgggttcccgcagggcacgcgcgcaatttccaggtggcctacaaccagctcggcagcaat
gagcgcttttcccgccaacgtcagttctacaccctgcacacggttcgcaagggcgaatca
ctgggtctgatcgccaagcgcaacggcaccaccattgcagcactgcaacacagcaacggc
atcaaaggcagcgtcgtccggatcggccaggtgctgaagatcccgccgcgcggcgtgact
gtcacccctgccgttcaagtcgcacgcaacgcccccgcaaaaccggcgtttcgccaacat
cgcgtccaacgcggccagaccttatcctcgatcgccacccggtacgatgtcagcctgacc
gaactgcgtaccgccaacggcctgggtcacggcaacctcatcaaggtgggacaaaccctg
cgcgtacccgcccgcaactaa
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