Sinimarinibacterium sp. NLF-5-8: GT972_01695
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Entry
GT972_01695 CDS
T06400
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT972_01695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_01695
Enzymes [BR:
sini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GT972_01695
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GT972_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHS11397
UniProt:
A0A6P1UDF4
LinkDB
All DBs
Position
complement(353097..353783)
Genome browser
AA seq
228 aa
AA seq
DB search
MTPALSAARRNAFRAQAAEITGIDTEVYARYGKDPLEPILGLGDARAPVGFFGRDPGRDE
VQHGEPFIGAGGQWVRRTLYQRLHGAPLPDFAASRAIGQGFYWANTVPYKPVGNKAWSTR
IKQRFQPLIAELLVEHWQGQNLMTLGREAFLWFGLLQPKAVKTAIDDFWAREDRFEAHAH
CTIDMRAPSGAQRTIQLHPLPHPSPLNATWYKHFPALLDARLAALGIG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagccctgagcgccgcgcgacgcaacgcctttcgcgcgcaagccgccgaaatc
accggcatcgataccgaggtctacgcccgctacggcaaagacccgctggaaccgattctg
ggattgggcgacgcgcgcgcgccggtcggcttttttggccgcgaccccggacgcgatgaa
gtgcagcacggtgagccgttcatcggcgccggtggccagtgggtgcgccgcacgctgtat
caacgcctgcacggcgcacccctgcccgactttgccgcctcgcgcgcgattggccagggt
ttttactgggccaataccgtgccctacaaacccgttggcaacaaagcctggagcacccgc
atcaagcaacgctttcaaccgctgatcgccgaactgctggttgaacactggcaaggccag
aatctgatgacgctcggacgcgaggcatttttatggtttggcctgctgcaacccaaggcc
gtcaagaccgcgattgacgatttctgggcgcgcgaagatcgttttgaagcccacgcccac
tgcaccatcgacatgcgcgcgcccagtggcgcccagcgcaccatccagctgcaccccctg
cctcacccctcccccctcaacgccacctggtacaaacattttccggcattgctggacgca
cggctggctgcactgggcatcggctaa
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