Sinimarinibacterium sp. NLF-5-8: GT972_01840
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Entry
GT972_01840 CDS
T06400
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sini03032
]
GT972_01840 (topA)
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_01840 (topA)
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GT972_01840 (topA)
DNA replication proteins [BR:
sini03032
]
Prokaryotic type
DNA Topoisomerases
GT972_01840 (topA)
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT972_01840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Methyltransf_24
Hamartin
Zn_ribbon_NUD
Zn_ribbon_8
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QHS09005
UniProt:
A0A6P1U5P6
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Position
complement(382096..383988)
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AA seq
630 aa
AA seq
DB search
MSNLLIVESPSKAKSIGAMLGSGWIVQASMGHVRDLPVKTIGIDRSTLAIDYIETEKGAS
TLARLRSALSRAQTVYLATDPDREGEAIAWHLAQALKLKPGTYHRVTYNEITETAIRKAI
DSPRQIDMALVDAQQARRALDRIVGYVVSPRLWQQSTDRALRLSAGRVQTPTTRLVVERD
RAIESFKPVNHFGVEIDLASTPAFTAKWITTPYQKSEDEPYVLDKTLAELVSKTPQVTVT
RFQQGTRAQNAPPPFTTAAMQQAANVKLDLSANDTMKLAQSLFENHHAITYHRTDSVTLA
DEAIEQIRKYASGKQYPLPDKPNIHASKVANAQEAHEAIRPTDPFNEAPAGVYGKELELY
KLIHRQAVASQLAPCILKTRSITLASVAFGEHAAGAFDFEAKGQQVLERGFTVLGNAPKE
TELPKVIQGDILNITEGRLLLQATKAPPAFTEASLLRALEKAGIGRPSTWAAIIENIKNR
NYIEIKAKKVCSTPVGRALIDALADMRFAEYNYTANLEEALDHVANGEIKFTDVINLGWS
DLETDLETKMGRFVTPAIAAKPAPASKKSASGSRSTSAKKTGSGQPSTARQKSATPPCPN
CGAPTVKRKGQYSEFWGCSTFPTCRGLIKI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcctgatcgtcgaatctccctccaaagccaaatccattggtgccatgctt
ggctccggctggatcgtccaagcctcaatggggcacgtccgtgatctgcccgtcaaaacc
attggcattgatcgctcaaccctcgccatcgactacatcgaaaccgaaaagggcgcatca
accctcgcgcgccttcgttccgccctgtctcgcgcccaaaccgtatacctcgccaccgac
cctgaccgcgaaggtgaagcgattgcctggcatctcgcacaagccctgaaactcaagcca
ggcacctaccatcgcgtgacctacaacgagatcaccgaaaccgcgatccgcaaagccatc
gacagcccccgccagatcgacatggcattggtcgatgcccagcaagcacgccgcgcactc
gatcgcatcgtcggctacgttgtctccccccggctctggcaacagtccacggatcgcgcc
ctgcgcctctccgctggccgcgtgcaaacgcccacaacccgcctggtcgtcgaacgtgac
cgcgccatcgaatccttcaagcccgtcaatcactttggcgtggaaatcgacctcgccagc
acgccagccttcaccgccaaatggatcacaacgccttaccagaaatccgaggacgaaccc
tatgttctcgacaagaccttggccgaactcgtcagcaaaacgccacaagtgaccgtcacc
cggttccagcaaggcacgcgcgcgcaaaacgcaccgccacctttcacaaccgctgccatg
caacaggctgcaaacgtcaagctcgatctgtcggccaacgacacgatgaagctggctcaa
tcgctgttcgaaaaccatcacgccatcacctatcaccgcaccgatagcgtgacccttgcc
gatgaagccatcgagcaaatccgcaagtatgcgtcaggcaagcaatatcccctgccggat
aagcccaacatccacgcatccaaggtcgccaacgctcaggaagcacacgaagccatccgc
cccacagaccccttcaacgaagccccggcaggcgtctacggcaaggagctggaactctac
aaactcatccaccgccaggctgtcgcctcacagcttgcgccctgcattctgaaaacccgc
tcgatcaccctcgcctccgtcgcgtttggcgaacacgctgctggtgcctttgacttcgag
gccaagggtcaacaagttctggaacgcggcttcactgtcctgggcaacgccccaaaggaa
acggaattaccaaaggtcatccagggtgacatcctcaacatcaccgaaggtcgcctgctc
cttcaagccaccaaggctccacccgctttcaccgaagcctcgttgctccgcgcccttgaa
aaagcaggcatcggacgcccttcgacatgggcagccatcatcgagaacatcaagaatcgc
aactacatcgagatcaaggcaaaaaaggtgtgctccacccccgttggtcgcgccctgatt
gacgcgctcgcggacatgcgattcgctgaatacaactacaccgccaacctcgaagaagca
ctggatcacgtcgccaacggcgagatcaagttcaccgatgtcatcaacctcggctggtct
gatctcgaaaccgatctggaaaccaaaatgggacgcttcgtgacaccggccatcgccgcc
aaacccgcgccagcctccaagaaatcggccagcggttcgcgtagcacgtcagcgaaaaaa
accgggtcaggccaaccctcgacagcgcgccaaaaaagcgcaacgccaccctgcccgaac
tgcggtgcgccgaccgtcaaacgcaaaggccaatactccgagttctggggatgctcgacc
ttcccgacctgccgtgggctgatcaagatttga
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