Sinimarinibacterium sp. NLF-5-8: GT972_03170
Help
Entry
GT972_03170 CDS
T06400
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GT972_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_03170
Enzymes [BR:
sini01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GT972_03170
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GT972_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2357
Motif
Other DBs
NCBI-ProteinID:
QHS09254
UniProt:
A0A6P1U891
LinkDB
All DBs
Position
complement(625116..626459)
Genome browser
AA seq
447 aa
AA seq
DB search
MNTSFKSPPARSVYQVSELVGTLRALIDDALPRVWVEGEVSNFSRPASGHWYFTLKDASS
QLRCAMFRNANFGIRPQPRDGDRVLLRGKPDIYSARGELQFICEHLEPAGEGELLRAFEA
LKKRLAAEGLFAEAVKRPIPPLPHRIGLITSATGAALHDVQSTLARRCPLIPVVLWPVPV
QGNDAAPAIARALQTLPRRVPVEVILLVRGGGSLEDLWAFNEESVARAIRACPVPVISGV
GHEVDFTIADFAADLRAPTPTAAAERATPDAQTWQRALRQHEARLTGALERTLRSARAQW
QQQQARLGAQHPQRRLQDAAQRLDDGSQRLSQALPRALIQRQQHLRQLCARLHASAPAHR
LVIRQRALQVWQTRLIHAQQRLLDRARSHWQQQRQSLQALDPHAVLLRGYAIARDDQGRA
LTDAAQVQRGDALRIRLARGEVDARAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctctttcaaatcgccccccgcacgcagtgtctatcaggtttccgagctggtc
ggcacgttgcgcgcactgatcgacgatgcgctgccacgggtctgggttgaaggcgaagtg
tccaatttttcacgcccggcatcagggcattggtacttcaccctcaaggacgccagcagc
caattgcgttgcgccatgtttcgcaatgccaactttggcatccgcccgcaaccccgggat
ggcgatcgtgtcctgctgcgcggcaaacccgacatctacagcgcgcgcggcgagctgcaa
ttcatctgcgaacacctggaaccggctggcgaaggcgagttgctgcgggcattcgaggcg
ctcaaaaagcgtcttgctgccgaaggcttgtttgcagaagcggtcaagcgcccgattccg
ccactgccccatcggattggcctgatcacctccgccaccggcgcggcgctgcacgatgtg
caatccaccctcgcccgccgctgccccctgatccctgtggtgctgtggccggtgccggtg
cagggcaatgacgcagcgcctgcgatcgcgcgcgcattgcaaaccttgcccaggcgcgtg
ccggtagaggtgattttgctggtacgcggtggcggctcactggaagatttgtgggccttc
aacgaagaaagcgtggcgcgcgccatccgcgcctgcccggtaccggtgatcagcggcgtc
ggccacgaagtggacttcacgattgccgactttgccgccgatctgcgcgcgccaacgccc
accgcagccgccgagcgtgcaacgccggacgcccagacctggcagcgcgcgctgcgccag
catgaggcgcgactcaccggcgcgcttgagcgaaccctgcgcagcgcgcgcgcgcagtgg
caacagcaacaggcacgcctgggcgcacagcacccgcagcgccggctccaggatgctgca
caacgactggatgacggcagccagcgtctgtcgcaggcattaccgcgcgcgctgatccag
cgccagcagcatctgcgccaactctgcgcgcgcctgcacgccagcgcgccggcacaccgc
ctggtcatccgccagcgcgcgctccaggtctggcaaacccgcctgatccacgcacagcaa
cgcctgctcgaccgcgcgcgcagccactggcaacagcagcggcaatccctgcaggcactg
gatcctcatgcggttctgctgcgcggctatgccattgcacgggacgatcaggggcgcgcg
ctgaccgacgccgcacaggtgcagcgcggcgatgccttgcgcattcggctggcacgcggc
gaggtggatgcgcgcgcgcagtga
DBGET
integrated database retrieval system
