Sinimarinibacterium sp. NLF-5-8: GT972_04680
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Entry
GT972_04680 CDS
T06400
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT972_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sini03000
]
GT972_04680
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_04680
Enzymes [BR:
sini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GT972_04680
Transcription factors [BR:
sini03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GT972_04680
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GT972_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QHS09522
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Position
930889..931722
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AA seq
277 aa
AA seq
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MLTLAYTPPYDWQGLLDFFAARSIAGVEKVEGDAYWRTVRLDDQLGWLCVRHDAQAQALT
VSLSDSLLSARAQIAARLRAQFDLDCQPQAVAKVLGALMAPYPGLRVPGAFDGFEAVVRG
VLGQQITVAAATTLAGRVATRLGTPLHTAHPALTHAFASARTLAAIEPDRLGQLGIVGTR
IAAIQGLAAAVDAGTIDLSPQADSANTQRALKALRGIGEWTAQYAALRALKDADAFPAAD
YGVMKALGVSKPQQALVRAQAWQPYRAYAALCLWRAL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgctggcctacacgccgccgtatgactggcaagggctgctcgatttttttgcc
gcgcgcagcattgccggcgttgaaaaagttgagggtgacgcctactggcgcacggtgcgg
ctggacgatcaactgggctggctttgcgtgcgccacgatgcccaggcacaggcgcttacc
gtcagcctgtcggattctttactgtctgcgcgcgcgcaaattgcagcgcggctgcgcgcg
cagtttgatctggactgccagccgcaggcggtagccaaggtgttgggtgcgctgatggct
ccgtatcccggactgcgcgtgcccggcgcatttgacggttttgaagccgtggtgcgcggc
gttttggggcagcaaatcaccgtggcggccgccaccaccttggccggacgtgtcgccacc
cggctgggcacgccgctgcacaccgcgcacccggcgctgacccacgcctttgccagcgcg
cgcaccctggccgcgatcgagcctgatcgtttggggcagcttggcattgttggcacccgc
atcgccgcgattcagggtttggcggcggccgtggatgccggaaccattgatttgagtcca
caagccgattctgcaaacactcagcgcgcgctcaaggcactgcgcggcattggcgagtgg
acagcgcaatacgccgcactgcgcgcgctcaaggatgcggatgcgtttccggcggcggac
tacggcgtgatgaaggcgctgggcgtgagcaagccacaacaggcgcttgtgcgcgcgcaa
gcttggcagccgtatcgcgcttatgcggcgctgtgtttatggcgcgcgctttga
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