Sinimarinibacterium sp. NLF-5-8: GT972_06560
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Entry
GT972_06560 CDS
T06400
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
GT972_06560
Enzymes [BR:
sini01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GT972_06560
Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GT972_06560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
QHS09850
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Position
1329128..1330210
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AA seq
360 aa
AA seq
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MRLRLLTLTLLSFCLTGLLPAHALENDESIWPRLVMRMQLVNNQQREIIDWARRYSRHPR
NVETMLARAEPYLWDIVQICERYRMPAEVALLPAIESGFNPHAQSPYKANGLWQFIPMTG
RTMGLPMNAQYDARRDTVASTTAAMRYLRRLHGMFGDWNIALAAYNIGEGGMQRYMAKQP
GVTDFWALELPRETFEQVRRLMAIALIVEKPHRFNVKLPRIADRPLTEKITLTGPTNLAL
AAHDARVPEQTIRTYNPGLVTLANSSAKQVLLLPPAQAQRMRTALKQKRYPPGRAPGAIV
KTAARTNARVHIIKRGDSLWTIARQHRVTVEALRRHNNLKKTAVLHPGKTLQIPPVGTRS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgcctcttgaccctgacgctgctgagtttttgcctcaccggcctgttgccc
gcccatgcgctggaaaatgacgagtcgatctggccgcggctggtgatgcgcatgcagctg
gtcaacaaccagcaacgtgagatcatcgactgggcacgccgctacagccgccatccgcgc
aacgtggaaaccatgctggcgcgcgccgagccgtatctgtgggacatcgttcaaatctgt
gagcgctaccgcatgccggccgaagtggcgctgctgcctgcgatcgaatccggcttcaac
ccccacgcgcagtcgccatacaaagccaacggcctgtggcagttcatccccatgaccggc
cgcaccatgggtttgccgatgaacgcccaatacgacgcacgccgcgataccgtcgccagc
accaccgcagcgatgcgctatctgcgccgcctgcatggcatgtttggcgactggaacatc
gcgctggcggcctacaacatcggcgaaggcggcatgcagcgctacatggccaagcaaccc
ggcgtcactgacttctgggcactggagctgccgcgcgaaaccttcgaacaggtgcgccgc
ctgatggcgattgcgctgatcgtcgaaaaaccccatcgcttcaacgtcaagctgccgcgc
atcgcggatcgaccgctgaccgaaaaaatcaccctcacaggccccaccaacctggcgctg
gcggcgcatgacgcgcgcgtgcccgagcaaaccatccgtacctacaatcccggcctggtg
acgctggccaacagcagtgccaaacaggtactgctgctgccaccggcgcaggcgcagcgg
atgcgcactgcgctcaaacaaaaacgctacccgcccggccgcgcgccgggcgccatcgtc
aagaccgccgccagaaccaacgcccgcgtacacatcatcaaacgcggcgattcgctctgg
accatcgcccgccagcatcgcgtgaccgtcgaggcactgcgccgccacaacaacctgaag
aaaaccgccgttctgcatcccggcaaaacccttcaaatcccgcccgtcggcacccgcagc
taa
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