Sinimarinibacterium sp. NLF-5-8: GT972_07295
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Entry
GT972_07295 CDS
T06400
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GT972_07295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sini02022
]
GT972_07295
02035 Bacterial motility proteins [BR:
sini02035
]
GT972_07295
Two-component system [BR:
sini02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
GT972_07295
Bacterial motility proteins [BR:
sini02035
]
Pilus system
Twitching motility proteins
GT972_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
wHTH-HSP90_Na-assoc
RWP-RK
HTH_8
Mg_chelatase
AAA
FleQ
MTA_R1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QHS09965
LinkDB
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Position
1503072..1504496
Genome browser
AA seq
474 aa
AA seq
DB search
MRAAPPAPPCKSVCQPGRLPIHLLPREFDVSTANVLVVDDEPDIRELVEIVLGRMGLHIS
SAANLDEARQRLREQTFDLCITDMRLPDGTGIELVHEIQQRCPYTPVAVITAYGNAEVAV
ESLKAGAFDFVAKPVDVPALRKLVDSALKLREHNTDNPENASPPSSDASTELLGTHHSIQ
ALRNLIERLARSQAPVHISGESGTGKELVARQIHLRGPRARAPFVAINCGAVPNELMESE
FFGHIKGSFTGAHRDKAGLFQAAEGGTLFLDEVAELPLHMQVKLLRALQERRVRPVGASQ
EIAVNVRIISATHENLAQRVSSGQFRQDLFYRLDVIAVHTPALRERPEDIPLLTEQILHR
IAARTGYADVPAVDAATLQALQAYSFPGNVRELENILERSLTLCDGITIYPADLQLRSDF
AIAPPPPLTLTDPAQTPAEVEQIEARAAQKLGISTRALRERLRKLGIQIPASPP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagcgccaccggcaccaccatgcaaatccgtatgtcagcccggccgcctgccg
attcatctactgccccgggagtttgatgtgagcaccgccaacgtgctggtcgttgacgac
gagccggatatccgcgagctggtcgaaatcgtgctgggacgaatggggctgcacatcagc
agcgccgccaatctcgacgaagcccgccagcgcctgcgtgagcaaaccttcgatctgtgc
atcaccgacatgcgcctgcctgacggcaccggcatcgaactggttcatgaaatccagcag
cgctgcccctacacgccggttgccgtgatcactgcctatggcaacgccgaggtggcagtg
gaaagcctcaaggccggcgcattcgacttcgtcgccaagccggtcgatgtcccggcgctg
cgcaaactggtcgacagcgccctcaagctgcgcgagcacaacacggacaatccagaaaac
gcgtcgcccccgtcttccgacgccagcaccgagctgctcggcacccatcacagcatccag
gcactgcgcaacctgatcgagcgccttgcacgcagtcaggcacccgtccacatcagcggt
gaatccggcaccggcaaggagctggtggcgcggcagattcatctgcgcggcccgcgcgcg
cgcgcgccatttgtcgccatcaactgcggggcggtgcccaacgagttgatggaaagtgaa
ttttttggccacatcaaaggcagtttcaccggcgcgcaccgcgacaaggccggcctgttc
caggccgccgaaggcggcaccctgtttctggatgaagtcgcggagctgcccctgcacatg
caagtcaaactgctgcgcgcgctgcaggagcgccgcgtccgaccggtgggcgcatcacag
gaaatcgccgtcaacgtgcggatcatttctgccacccatgaaaatcttgcccaacgcgtc
agcagcggccagttccgccaggacctgttctatcggctggacgtgatcgcagtacacacg
cccgcgctgcgcgaacgccccgaagacatcccgctgttgaccgaacagatcctgcaccgc
atcgccgcgcgcaccggctacgccgatgtccccgccgtcgatgccgccaccctgcaagcc
ctgcaagcctattcattccccggcaacgtgcgcgagctggaaaacatcctggagcgcagc
ctgacgctgtgcgacggcatcaccatttacccggcagacctgcaactgcgcagcgatttt
gcgattgccccgccgccaccgctcaccttaaccgaccccgcccagacccccgccgaggtc
gagcagatcgaagcgcgcgctgcgcaaaagctcgggatttccacccgtgcgctgcgcgaa
cggctccggaaactggggatccagatcccggcctcgcccccataa
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