Sinimarinibacterium sp. NLF-5-8: GT972_08275
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Entry
GT972_08275 CDS
T06400
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sini02000
]
GT972_08275
Transporters [BR:
sini02000
]
Other transporters
Pores ion channels [TC:
1
]
GT972_08275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QHS10137
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Position
complement(1706937..1708133)
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AA seq
398 aa
AA seq
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MRHMLASATALALLWSCSAAAVTVDDYDIPYVGAGYNFEISDSARESGNGNGFDLRFGWP
LTQWGYSNLAVEGQFHALQRKRDVDGQHDYQRGIMLDLVYDFGSLGWQNGFVFKPFVLGG
LGVVQDDVRGDSRNSFGLNFGGGALIPLPWLGLAARLDARIQAQDNKKSVPGEDILIDYR
IGAGLQLPLSMFFTPAEHRAPAPAQECELAVVDPITGRSDCGVDSDRDGVIDSLDECPDT
PFGAVVDGRGCPMSAVALPMPEESPCFGGFDVQGQACADHGVDSGAGVVLENVTFENSDA
ILTGEARRALDQMADSLKAQPSVRIEIGGHTDNVGNESFNHILSQERAESVRQYLISRGI
DSGRLVAMGYGQFRPIASNRTEAGRAQNRRVEFRIIVD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatatgcttgcttctgccactgcgctggccttgctgtggtcgtgctcggcggct
gccgtcaccgtagacgattacgatatcccctacgttggtgccggttacaactttgaaatc
agcgacagcgcgcgcgaatccggcaacggcaacggttttgacctgcgctttggctggccg
ctgacgcaatggggttattccaatctggccgtcgaagggcaattccacgccctgcaacgc
aagcgcgatgtcgatggccagcacgactatcagcgcggcatcatgctcgatctggtttac
gactttggcagcctcggctggcagaacggttttgtgttcaagccgttcgtgctgggcggg
ctgggcgtggtgcaggacgatgtgcgcggggattcgcgcaattcgttcgggctcaatttt
ggcggtggtgcgctgattccgctgccgtggctggggctggcggcgcggctggacgcgcgc
atccaggcgcaggacaacaagaagtccgtgccgggcgaagacattctgatcgattaccgg
atcggcgcgggcctgcaactgcctctgtcgatgttctttaccccggccgagcatcgtgcc
ccggcacctgcacaggaatgtgagctggcggttgtcgatccgatcactgggcgcagcgat
tgcggcgtggattccgatcgtgatggtgtcatcgacagcctggatgaatgccccgatacg
ccttttggcgcagtcgtcgatggccgtggttgtcccatgagcgccgtggcgctgccgatg
ccggaagaatcgccgtgctttggcggttttgatgtgcagggacaagcctgtgccgatcat
ggcgttgacagcggtgctggcgttgtgctcgaaaacgtcacctttgagaacagcgatgcc
attctcaccggcgaggcgcgccgcgcactcgatcagatggccgactcactcaaggcgcag
ccttcggtgcggatcgagatcggcgggcataccgataacgtcggcaatgaatcgttcaac
cacatcctgtcccaggaacgagccgaatcggtgcggcagtacctgatttcgcgcggcatc
gacagtggccggctggtggcgatgggctatggccagttccgtccgattgcctccaaccgc
accgaagccgggcgcgcgcagaaccgccgcgtggagtttcgcatcatcgtcgattga
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