Sinimarinibacterium sp. NLF-5-8: GT972_09070
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Entry
GT972_09070 CDS
T06400
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_09070
Enzymes [BR:
sini01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GT972_09070
DNA repair and recombination proteins [BR:
sini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GT972_09070
Prokaryotic type
GT972_09070
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHS10274
UniProt:
A0A6P1UB31
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All DBs
Position
complement(1888889..1890337)
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AA seq
482 aa
AA seq
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MTATALVWLRRDLRCTDHAALYHALRRFDRVYCAFVFDTDILDALPSRQDRRVAFIHASV
VELHARLQQLAADHGAPGGGLIVRHGSAARCIVELAQSLGVQEVLTNRDYEPTAIARDQQ
VAADLHARGIAFSDYKDQVLLERDEVLTRQGQHYSVFTPYKRAWLQKLDAFQLKAYPLER
YAQRLAPPPAGEPLPSLQDLGFTAAPSLPRALPTGSSGAMQLLNDFVPRMAHYQRARDFP
SVKGVSYLSVHLRFGTVSIRQLAALAAAQAAQGCVGAQTWLSELAWRDFYFMILWRHPKV
VTQSFKPQFDRVQWDEAPALWQAWCQARTGYPLVDAALRQLLHTGYMHNRLRMVVASFLT
KDLGIDWRRGERFFAEHLNDYDLAANNGGWQWAASTGCDAQPWFRIFNPITQSQKFDPKG
QFIRRYLPELARVPDAHIHFPAAMKPLERQACDLQLGRDYPHPIVDHAQARERTLARFSG
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccgccctggtttggctgcgccgcgacttgcgctgcaccgatcacgccgcg
ctgtatcacgcgctgcggcggtttgatcgggtgtattgcgcgtttgtgtttgataccgac
atcctggatgcgctgcccagccgccaggatcggcgcgtggcgtttatccacgccagcgtg
gtggaactgcacgcgcgcttgcagcagttggccgccgatcacggcgcgcccggtggcggg
ctgatcgtgcgtcacggcagtgccgcgcgctgcatcgttgagctggcgcaaagccttggt
gtgcaagaggttttaaccaatcgcgattacgaacccacggccatcgcgcgcgatcaacag
gttgccgctgacttacacgcgcgcggcattgcctttagcgattacaaagaccaggtgctg
ctggagcgcgacgaagtgctcacccggcaaggccagcattacagtgtttttaccccgtac
aagcgcgcgtggctgcaaaagctggatgcgtttcaactcaaagcctatccgctggagcgc
tacgcccagcgcctggcgccgccgcccgcaggcgagccgttgccgagcttgcaagacctc
ggttttaccgctgcaccttcactgccgcgcgcgctgcccaccggaagcagcggtgcaatg
caattgctcaacgactttgtcccgcgcatggcgcactaccaacgcgcgcgcgatttcccc
agcgtcaaaggcgtgtcgtatctatcggtgcatctgcgctttggcacggtgtcgatccgc
cagcttgcggcgctggccgccgcccaagccgcacaaggctgtgtgggcgcacaaacctgg
ttgtcggagctggcatggcgcgatttttatttcatgattttgtggcgtcaccccaaggtg
gtcacgcaatcctttaagccgcagtttgaccgcgtgcaatgggacgaagcgccggcgtta
tggcaagcctggtgccaagcgcgcaccggctatccgctggtggatgcggcgctgcgccaa
ctgctgcacaccggctacatgcacaaccgcctgcgcatggtcgtcgccagttttttaacc
aaggatctgggcatcgactggcgtcgcggcgagcgtttttttgccgagcatttaaacgac
tacgatctggccgccaacaacggcggctggcagtgggcggcgtccaccggctgcgacgca
cagccgtggtttcggatcttcaaccccatcacccaatcgcaaaagtttgatcccaaaggt
caattcatccgccgctacctgcccgaactggcgcgcgtgcccgacgctcatatccacttt
ccggcagcgatgaaaccgctggagcgccaggcctgcgacctgcaactggggcgcgattat
ccccatcccatcgttgatcacgcccaggcgcgcgaacgcacgctggcgcggttttcaggg
ctgaggtaa
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