Sinimarinibacterium sp. NLF-5-8: GT972_09645
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Entry
GT972_09645 CDS
T06400
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sini03009
]
GT972_09645 (rimO)
Enzymes [BR:
sini01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GT972_09645 (rimO)
Ribosome biogenesis [BR:
sini03009
]
Prokaryotic type
ribosomal protein modification factors
GT972_09645 (rimO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QHS10371
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All DBs
Position
2006732..2008120
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AA seq
462 aa
AA seq
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MSAPESAQNPSASRARAKVSAPTAAAPKVGFVSLGCPKALVDSERILTQLRAEGYETAPS
YNAADVVVVNTCGFIDAAVEESLEAIDEALAENGKVIVTGCLAAGPKSHTVRERFPNLLS
ISGPQDYSSVMNAVHHAVPPAHDPFFDLLPPQGIKLTPKHYAYLKISEGCNHKCSFCIIP
SMRGKLASRPVSEVLVEAEKLVKSGVQELLVISQDTSAYGADLKYAPGQWRGHNYDTRLL
DLCNGLGELGAWVRLHYVYPYPHVDDIIPLMAQGKILPYLDIPFQHASTSILKAMKRPAA
AENTLKRLAHWRSICPELTVRSTFIVGFPGETDDDFEQLLDWLDEAQLDRVGCFEYSPVE
GATANALPGTVPDEVKAERHHRFMQKQAEISAAKLQRKIGQTIEVLMDEIHDDAASVGRS
WADAPEIDGKVYIKGKIKPLPGQRLQVKVVDADEYDLFAVLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccagaatccgcccaaaacccctctgcctcacgcgcgcgcgcgaaggtttct
gcgccgactgcggcggcgcccaaagtcggctttgtttcgctgggctgccccaaggcgctg
gtggactccgagcgcatcctcacccagctgcgcgccgaaggctatgaaaccgcgcccagc
tacaacgccgccgatgtggtggtggtcaatacctgcgggttcattgacgcggcagtggaa
gaatcgctggaggcgatcgacgaggccctggccgaaaacggcaaggtcatcgtcaccggc
tgccttgccgcgggccccaaaagccataccgtgcgcgagcgctttcccaatctgctgtcg
atctccgggccgcaggattacagcagcgtgatgaatgccgtgcatcacgcggtgccaccg
gcgcacgatccgttttttgatttgctgccgccgcagggcatcaagctcacgcccaagcac
tatgcgtatttaaaaatctccgaaggctgcaaccacaaatgcagcttctgcatcatcccg
tcgatgcgcggcaagctggcttcgcgtccggtcagcgaggtgctggtggaggctgaaaaa
ctggtcaaatccggcgtgcaggaactgctggtgatcagccaggatacgtctgcctacggt
gccgacctcaaatacgcacccggccaatggcgcgggcacaactacgacacccgcttgctg
gacttgtgcaacggcttgggtgaactgggcgcctgggtgcggctgcattatgtgtacccg
tacccgcatgtggatgacatcatcccgttgatggcacagggcaaaatcctgccgtatctg
gacatcccgttccagcacgcgtccacatccatcctcaaggcaatgaagcgcccggcagcg
gcagaaaacacgctcaagcgcctcgcccattggcgcagcatctgcccggagctgacggtg
cgctccaccttcatcgttggctttcccggcgaaaccgacgatgacttcgagcagttgctg
gactggcttgacgaggctcaactcgatcgcgtcggctgttttgaatactccccggtggaa
ggcgccaccgccaacgccctgcccggcacggtgccggatgaagtcaaagccgagcgtcat
catcgcttcatgcaaaagcaggccgaaatcagcgccgccaaactgcaacgcaagatcggc
cagaccatcgaagtgctgatggatgagattcacgacgacgccgccagcgtggggcgctcc
tgggccgatgcgcctgaaatcgacggcaaggtctacatcaagggcaaaatcaaaccgctg
ccggggcaacgcttgcaggtcaaggtggtggacgccgacgagtacgacttgtttgccgtg
ctggcgtaa
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