Sinimarinibacterium sp. NLF-5-8: GT972_10080
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Entry
GT972_10080 CDS
T06400
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sini03009
]
GT972_10080 (rsmB)
Enzymes [BR:
sini01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GT972_10080 (rsmB)
Ribosome biogenesis [BR:
sini03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GT972_10080 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltr_RsmF_N
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QHS10443
UniProt:
A0A6P1UD84
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All DBs
Position
2097400..2099556
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AA seq
718 aa
AA seq
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MKKPPSSGTPRPGARGKSFGAPRKPYDGKPRPPRARGDGEARSDFRSDARPPRGEGAWRS
RDGDARPPRKSFDGTPHPPRGEGAWRSRDGDARPPRKSFDGNPRPPREEGAWRSRDGDAR
PPRKSFDGNPRPPRARFDGDSRSDFRADARPPRKSFDGSPRPPRARFDGDSRSDSRADSR
PPRGEDAWRSRDGDARLPRKSFDGNPRPPRARFDGDSRSDSRSDVRPPRGEGAWRGRDGD
ARPPRKSFDGSPRPPRARFDGEARPRPRGDFKPRSGPRSSDGGGGAIHRANVRAVAARSI
SRVMRGRSLDDALAPTAQMRVAADAAMVKALAFGVLRELSILKWLAAQLLDKPLEAQDDE
VAALIWVGLYQLRTLKTPPHAAINETVDAIKLLKHDYARGMINAILRRYTREAEALEERL
PSEPSLRTSHPGWLVEKLYHDWPAQWEALLDANNVQAPLTLRVNRRRISREDYLARLAEM
QIGAEAHPHATDAVVLEVARAVDKIPGFVGGQVSVQDASAQLAVQLLAVADGQRILDACA
APGGKTAHILEHADARVTALDVDGARLTRVDENLRRLNLSAEMIAADAAQPDRWWNGQAF
DRILLDAPCSGTGVIRRHPDIKWLRRTTDIATLQQTQLGLLKALWPLLKVGGRMVYATCS
LLRDEGDEVLSRFKRLADDVTITAIDAEWGEATEYGRRIAPGGTHDGFYYAVLEKRAP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaccaccttccagcggcacaccgcgccccggcgcgcgcggtaaatccttcggc
gccccgcgcaaaccctacgacggcaagccacggccaccgcgcgcgcgcggtgacggtgag
gcgcgttcagattttcgatctgacgcgcgtccaccgcgcggcgaaggcgcctggcgtagc
cgcgatggggatgcccgtccgccacgcaaatcatttgacggcaccccgcacccgccgcgc
ggcgaaggggcctggcgtagccgcgacggcgacgcccggccgccacgcaagtcgtttgat
ggcaatccgcgcccaccgcgtgaggaaggcgcctggcgcagccgcgacggggatgcccgt
ccgccacgcaagtcgtttgatggcaatccgcgcccaccgcgcgcgcgctttgatggcgat
tcccgttcagactttcgtgccgatgcccgtccgccacgcaaatcatttgacggcagtccg
cgcccaccgcgcgcgcgctttgatggcgattcccgttccgactctcgtgccgactcgcgc
ccaccgcgtggggaagacgcttggcgcagtcgcgacggggatgcccgtctgccacgcaag
tcgtttgatggcaacccgcgcccaccgcgcgcgcgctttgatggcgattcgcgttcagac
tctcgttccgatgtccgtccaccgcgcggcgaaggggcctggcgcggccgcgatggggat
gcccgtccaccgcgtaagtcatttgacggcagtccgcgcccgccgcgcgcgcgctttgat
ggtgaggcgcgtccacgcccgcgaggtgatttcaaaccccgcagcgggcctcgcagcagc
gacgggggcggcggtgcgatccatcgcgccaatgtgcgcgcggtggccgcgcgcagcatc
agccgtgtgatgcgcggccgcagcctcgacgatgcccttgcgcccaccgcgcaaatgcgg
gtcgcggcagatgcggccatggtcaaggcgctggcgtttggggttttgcgtgagctgtcc
atcctcaagtggctggcggcgcaactgctggacaagcccctggaggcgcaggacgacgaa
gtcgccgcactgatctgggtggggctgtaccagttgcgcacgctcaagactccgccgcac
gcggcgatcaacgaaaccgtggatgcgatcaagctgctcaagcacgattacgcgcgcggc
atgatcaacgccattttgcgccgctacacgcgcgaggccgaagccctggaagaacgcctg
cccagcgagccgagcctgcgcacctcacaccccggctggctggtggaaaagctctatcac
gactggccagcgcaatgggaggcgttgctggacgccaacaacgtgcaggcaccgctgacg
ctgcgggtgaatcgccgccgtatcagtcgtgaggattacctcgcgcgcttggctgaaatg
cagattggcgccgaagcgcatccgcacgcaaccgatgccgtggtgctggaagtcgcgcgc
gcggtggacaaaatccccggctttgtggggggtcaggtttcggtgcaagacgcctcggcg
cagttggccgtgcaattgctggccgtggccgacggccaacgtattctggacgcctgcgcc
gcccccgggggcaagaccgcgcacattctggaacacgccgacgcgcgcgtgaccgcgctg
gacgttgacggcgcgcgcctgacccgcgtggatgaaaacctgcgccgcttgaacctcagc
gccgagatgatcgccgccgatgccgcgcagccggatcgctggtggaacggtcaagcgttt
gaccggatcctgctcgacgcgccctgctccggcaccggcgttatccgccgtcatcccgac
atcaaatggctgcgtcgcaccaccgacattgccacgctgcaacaaacccagctgggcctg
ctcaaggcgctgtggccgctgctcaaagtgggcgggcgcatggtgtacgcgacctgctcg
ctgctgcgcgacgaaggcgacgaggtgctgtcgcgcttcaaacggctggccgatgacgtc
accatcaccgccatcgacgccgaatggggcgaggccaccgagtatggtcgccgcatcgcc
cccggcggcacccacgacggcttttattacgccgttttggaaaagcgcgcgccataa
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