Sinimarinibacterium sp. NLF-5-8: GT972_10215
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Entry
GT972_10215 CDS
T06400
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini00061
Fatty acid biosynthesis
sini00071
Fatty acid degradation
sini01100
Metabolic pathways
sini01212
Fatty acid metabolism
sini02024
Quorum sensing
sini04146
Peroxisome
Module
sini_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GT972_10215
00071 Fatty acid degradation
GT972_10215
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GT972_10215
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT972_10215
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sini01004
]
GT972_10215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sini04147
]
GT972_10215
Enzymes [BR:
sini01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GT972_10215
Lipid biosynthesis proteins [BR:
sini01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GT972_10215
Exosome [BR:
sini04147
]
Exosomal proteins
Exosomal proteins of breast milk
GT972_10215
Exosomal proteins of breast cancer cells
GT972_10215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QHS10465
UniProt:
A0A6P1UA83
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All DBs
Position
2135966..2137612
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AA seq
548 aa
AA seq
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MSVKNPVETLLQWAQQKPGQPWLYQSIDGVWKGYTWADAEAQVRSMATALRALDLPPGAA
IAISGRNTAHWVLADMAISMAGYISVGLYPKQSPDHIRYILNHCEAKAVFVGPMIDLDEF
MGALPEGIKTIGFPYPNLPICDHQWDDLVKAHEPFAGYQAPDPKAVISLIYTSGTTGNPK
GVMVTTENLIFATQGMMKMMPAQGQERFFSYLPLAHAFERGAVELASIYLGAEVWFLEDL
NKLAEQLKEVAPTRFFGVPLVFGRIQSGILKKLPQKKLSRLLRIPLVSGFIKKKLREGVG
LQNARYLIAGAAPMPMSMLEWFESIGMPIMQGYGMTENNIYATVNLPHANRNGSVGRANP
GADMRIAEDGEIQYKHAAVSPGYYKDPAKTAELFTEDGWLRTGDLGRIDEDGYLFITGRV
KDIFKTLKGKYVAPAPIEGAMARNGDIDQLCFVGTGLKQPIMVVQLVPGNKPREQIEQGL
IADMQDVNATLEPHEQIAKIYITKDAWTIDNNIMTPTMKVKRNEIEKHYLEKLHAIADDY
ATKVVWEA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaagaatccagtcgaaaccctgctgcaatgggcgcagcaaaaacccggccag
ccgtggctgtatcagtcgatcgacggggtctggaagggctacacctgggccgatgccgag
gcgcaggtgcgctccatggccacggcgctgcgcgcgctggatttgccgccaggtgcggcc
atcgccatctcggggcgcaataccgcgcactgggtgctggccgatatggcgatctcgatg
gcgggctacatcagcgtggggctgtatcccaaacaatcacccgaccatattcgctacatc
ctcaaccactgcgaggccaaggcggtttttgtagggccgatgatcgacctcgacgagttc
atgggcgcgctgcccgaaggcatcaaaaccatcggctttccctaccccaatctgcccatc
tgcgatcaccagtgggacgatctggtcaaggcgcacgagccttttgcgggctatcaggcg
cccgatcccaaggccgtgatttcactgatctacacctcgggcaccaccggcaaccccaaa
ggcgtgatggtcaccactgaaaacctcatctttgccacccagggcatgatgaaaatgatg
cccgcgcaaggccaggaacgtttcttctcctacctgccgctggcgcacgcctttgaacgc
ggcgcggtggaactggcctccatctatctgggcgcggaagtatggtttctggaagacctc
aacaagctcgccgagcagctcaaagaagttgcgcctacgcgcttttttggcgtgccgctg
gtctttggccgcatccagtccggcatcctgaaaaaactgccgcagaaaaaactcagccgc
ctgctccggattccgctggtctccggcttcatcaaaaagaagctgcgcgaaggcgtgggc
ctgcaaaacgcacgctatctgatcgccggcgccgcacccatgccgatgtcgatgctggag
tggtttgaaagcattggcatgccgatcatgcagggttacggcatgaccgaaaacaacatc
tacgccaccgtcaacctgccgcacgccaatcgcaacggctcggtgggccgcgccaatccg
ggcgccgacatgcgcatcgccgaagatggcgaaatccagtacaaacacgccgccgtctcc
cccggctactacaaagacccggccaaaaccgccgaactgttcaccgaagacggctggctg
cgcaccggcgacctgggacgcatcgacgaagacggctacctgttcatcacagggcgcgtc
aaagacattttcaaaaccctcaaaggcaaatacgttgcccccgccccgattgaaggcgcg
atggcacgcaacggcgatattgaccagctctgcttcgtcggcaccggcctcaaacaaccg
atcatggtcgtgcaactcgtccccggcaacaaaccgcgcgaacaaatcgaacaaggactg
attgccgacatgcaagacgtcaacgccacgctggaaccacacgagcaaatcgccaaaatc
tacatcaccaaagacgcctggacgattgataacaacatcatgacgccgacgatgaaggtc
aaacgcaacgagattgaaaaacactatctcgaaaaactgcacgccatcgcggatgactac
gcaaccaaagtggtgtgggaggcttga
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