Sinimarinibacterium sp. NLF-5-8: GT972_10275
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Entry
GT972_10275 CDS
T06400
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini00550
Peptidoglycan biosynthesis
sini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GT972_10275 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sini01002
]
GT972_10275 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
GT972_10275 (dacB)
Enzymes [BR:
sini01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GT972_10275 (dacB)
Peptidases and inhibitors [BR:
sini01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GT972_10275 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GT972_10275 (dacB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
KR
Motif
Other DBs
NCBI-ProteinID:
QHS10474
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All DBs
Position
2152988..2154457
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AA seq
489 aa
AA seq
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MRFFVHALLLSLAAYSHHAHANWDALQELRAKRGARVTAIAVDLDTGKTLQSLDADVRLT
PASLSKVVLAAAALQHWNPDKTFATQVFANGLPQSGTLNGDLVVRSQGDATFDHQALWFL
AAQIKRAGVRAVAGDLVIQAAPFGLLACETKDRCVALRRSSSAYDAPLSAFGVDYGTWCV
DVLPRHGQPSARVQSCAAVDVPIPLEGQIQTKAPKHKTALWLDRITRPESEALVMGGDMT
VDAPSQRLYRSMADPALGAGLLLRQVLGELGIQIKGRVRVSTDLNSHANTLLAQTDSAPL
REQIGRLLRYSNNYITDVLTLALAAEHTPGATGSLALASQPLEEFVLDARARSGYPAPAS
VHDRPVMHSGSGLTPDNRLSALDIAAVLRQQYMDPSTFPVFYAGLVIPGQSEGRRWRVGN
GAWKQRVALKTGTLTVPISTFGTAGYLRKKNGGWMAFVALANGQPRKGIASADVLAAIRQ
DVETLLNRY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttttgtccacgcgctgctgctgagccttgcagcgtattcacaccacgcccac
gccaactgggacgccctgcaagaactgcgcgccaagcgcggcgcccgcgtgaccgccatt
gccgttgatctggacaccggcaaaaccctgcaatcgctggatgccgatgtgcgcctgaca
ccggcatcgctgagcaaagtggtgctggccgccgccgcgctgcaacactggaatcccgat
aaaacctttgccacacaagtgtttgccaacggcctgccgcaaagcggcacgctcaacggc
gatctggtggtgcgcagccagggcgatgccacttttgaccatcaggcgctgtggtttctg
gccgcacagatcaagcgcgcgggcgtgcgcgcggtggccggcgatctggtgatccaggcc
gcaccgtttggcctgctggcgtgcgaaaccaaggatcgctgcgttgccctgcggcgcagc
tccagcgcctacgatgcaccgctctccgcgtttggcgtggattacggcacctggtgcgtg
gatgtgctgccgcgccatggccagcccagcgcgcgcgtgcagagctgcgccgccgtggat
gtgccgattccgctggaaggacaaatccagaccaaagcgcccaagcacaaaaccgcgctg
tggctggatcgcatcacccgcccggaaagcgaagcactggtgatgggcggcgacatgacc
gttgatgccccttcgcagcggctgtatcgctcgatggccgatccggcactgggcgccggg
ctgctgctgcgtcaggtgctgggcgagctgggcatccagatcaaaggccgcgtgcgcgtc
agcaccgatctcaacagccacgccaacaccctgctggcacaaaccgacagcgcaccgctg
cgcgaacagattggccgcctgctgcgctactccaacaactacatcaccgacgtgctgacg
ctggcgctggccgccgaacacacccccggcgccaccggctcgctggcgctggcctcgcag
ccactggaagaatttgtgctcgacgcgcgcgcgcgcagcggctaccccgcccccgccagc
gtgcacgatcggccggtcatgcacagcggcagcggactgacccccgacaaccgcctgtcg
gcgctggatatcgccgccgtgttacgtcagcagtacatggacccttcaacctttccggtg
ttctacgccgggctggtgatccccggccaatccgaaggccgccgctggcgcgtgggcaat
ggtgcctggaaacagcgcgttgccctcaaaaccggcaccctcaccgtaccgatctccacc
tttggcaccgccggatatctgcgcaagaaaaacggcggctggatggcctttgtcgccctt
gccaacggccagccgcgcaaaggcattgcgtctgccgatgtcctggcggccatccgccag
gatgttgaaaccctgctcaaccgttattga
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