Sinimarinibacterium sp. NLF-5-8: GT972_10750
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Entry
GT972_10750 CDS
T06400
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03030
DNA replication
sini03410
Base excision repair
sini03420
Nucleotide excision repair
sini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT972_10750 (polA)
03410 Base excision repair
GT972_10750 (polA)
03420 Nucleotide excision repair
GT972_10750 (polA)
03440 Homologous recombination
GT972_10750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sini03032
]
GT972_10750 (polA)
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_10750 (polA)
Enzymes [BR:
sini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT972_10750 (polA)
DNA replication proteins [BR:
sini03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GT972_10750 (polA)
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GT972_10750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT972_10750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
IMS_HHH
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QHS10559
UniProt:
A0A6P1UBF6
LinkDB
All DBs
Position
complement(2254011..2256761)
Genome browser
AA seq
916 aa
AA seq
DB search
MSQNPAKPLILIDGSSWLFRAYHALPPLTNAQGQPTGAVFGMANMLRKLLKDFAPERICV
VFDAPGKTFRDDWYPAYKANRDATPDDLKSQFASVLTLIDGMGLPLLSVEGVEADDVIGT
LAVQASARGQSVLIVTSDKDMAQLVSARVHLLDTMKNRQMDPDGVIEKFGVRPEQIIDYL
ALTGDAVDNIPGVPGVGPKTAAKWLNQFETLDDLIAGADQIGGKIGEKLRAHLDQLPLSR
RLTTIVTDVELPTTLDQLTPRAPDHARLAALFEQQGFSRLLAEARAAQGASADPDVTAVP
AEQRQTEVTTVLTEPQLQDLLTALAAAPLICFDTETNGLDANDAALVGLAFAVEPGAGWY
VPVAHDYLGAPPQLARARVIEAVKPILQDPARAKLAQNAKFDLNVLARHGIVVQGLAHDT
MLQSYVLDAAGNRHDMDTLALKYLGHTTTQFTDVAGKGRHQLTFNQVDLAQAAPYAAEDA
DITLRLHRVLYPQVQATAALVEVYQRIEMPLVPVLAQVEQHGVKVDVALLHTISAELAER
MAELEKQAHAEAGSEFNLGSPKQLGVILYEQLKLPVLGKTPKGEPSTAESVLDELAAEHP
LPRLILDWRSLQKLRSTYTEQLPQAVNPRSGRIHTSYHQAVAATGRLSSSNPNLQNIPTR
NAEGRRIRQAFIAEPGNALLSIDYSQIELRLMAHFSGDAGLQQAFIDGRDIHQATAAEVF
GYPIDAVPGERRRAAKAINFGLIYGMSSFGLARQLGITRYEAQDYIDRFFGRYPGVKRFM
DDTRQSARARGYVETLFGRRLYLPDINAKNANLRNYAERTAINAPLQGTAADLIKLAMID
IAEFLQQHAADVRMIMQVHDELVFEGAADVLPALAPQIAERMCRITRLEVPLVADWGVAP
EWDHAHTPMGRASVWK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaaccctgccaagccgctgattctgattgatggatcgagctggttgtttcgc
gcttatcacgcgctgccgccgctgaccaatgcccaggggcaacccaccggcgcggtgttt
ggcatggccaatatgctgcgcaagctgctcaaggactttgcgcccgagcgtatctgcgtg
gtgtttgatgctcccggcaagacctttcgtgatgactggtatcccgcctacaaggccaat
cgtgatgccacaccggatgatctgaaaagccagtttgcttcggtgctgacactgatcgac
ggcatggggctgccgctgctgagtgttgaaggcgtggaggccgatgatgtgatcggcacc
ctggcggtacaggccagcgcgcgcggccagagtgtgctgatcgtcaccagcgacaaggac
atggcgcaactggtcagcgcgcgcgtgcacctgctcgatacgatgaaaaaccgccagatg
gaccccgatggcgtcatcgaaaagtttggcgtcaggcccgagcagatcattgattatctg
gcgctgaccggcgatgccgtggataacattcccggcgttcccggcgttggccccaagacg
gcggccaagtggctgaatcagtttgaaacgctggatgatctgatcgccggcgcggatcag
atcggcggcaagatcggtgaaaaactgcgcgcgcatctggatcagctgccgctgtcgcgg
cggttgaccaccatcgtcaccgatgtcgaattgccgacgacgctggatcagctcacgccg
cgcgcgcccgatcacgcgcgcctggcggcattgtttgaacagcaaggcttcagccgcctg
ctggcagaagcgcgcgcggcgcagggagcctctgccgatccggacgtcacggcggtgcct
gccgagcagcggcagaccgaggtcacgaccgtgctcaccgagccgcagttgcaggacttg
ctgaccgcgctggcggcagccccgctgatctgcttcgacaccgaaaccaatggcctggac
gccaacgatgcggcgctggtgggactggcgtttgccgtcgaacccggcgcgggctggtat
gtgccggtggcgcatgattatctcggcgcgccgccacagctggcgcgcgcgcgggtgatc
gaagcagtcaagccgattctgcaagatccggcgcgcgccaagctcgcgcaaaacgccaag
tttgatctgaacgttctggcccgtcacgggatcgtcgtgcaggggttggcgcacgacacc
atgctgcaaagttatgtgctggatgccgcaggcaaccgtcacgacatggatacgctggcg
ctcaagtatctggggcataccaccacccagtttacggatgtggccggcaagggtcgccac
cagctcaccttcaatcaggtggatctggcgcaggctgcgccttatgccgcagaagatgcc
gatatcaccctgcggctgcatcgcgtgctgtatccgcaggtgcaggcgacagcggcgctg
gtcgaggtttaccagcgcatcgaaatgccgctggtgccggtgctggcacaggtggagcag
cacggggtcaaggtcgatgtggcattgctgcacaccatcagcgccgagcttgccgaacgc
atggccgaactcgaaaaacaggcgcatgccgaggccggcagcgagttcaatctggggtcg
cccaagcagctcggcgtgatcttgtatgaacagctcaagttgccggtgctgggcaagacc
cccaagggcgaaccgtccaccgccgaaagcgtgctcgatgaactggccgccgaacatccg
ctgccacggttgatcctggattggcgcagcctgcaaaaactgcgatcaacctataccgag
cagttgccacaggccgtcaacccgcgcagtggacgcatccacacctcctaccatcaagcc
gtggccgccaccgggcggctgtcatcatccaaccccaatctgcagaacatccccacccgc
aatgccgaaggacggcgcatccgtcaggccttcattgccgagccgggcaatgccctgctg
tcgatcgactattcacagatcgaactgcggctgatggcgcatttttccggcgacgccgga
ctacagcaggcgtttatcgacggccgcgacattcaccaggccaccgccgccgaagtgttc
ggctatccgatcgacgcggtaccgggcgagcgccgtcgtgccgccaaggcgatcaatttt
ggcctgatttacggcatgtccagctttggtctggcacgccagctgggcatcacccggtat
gaggcacaggactacatcgaccgtttctttggccgctatccgggtgtcaagcgtttcatg
gacgacacccggcaaagcgcgcgcgcgcgcggctatgtcgaaaccttgtttggtcgccgt
ttgtacctgccggacatcaatgccaaaaacgccaacctgcgcaactatgcggaacgcacc
gccatcaatgcgccgctgcaaggcactgccgcagatctgatcaaactggcgatgatcgac
atcgccgagtttttacagcagcacgcggccgatgtgcggatgatcatgcaggtgcatgac
gagctggtttttgaaggcgcggccgatgtgctgccggcgctggcgccgcagattgccgag
cgcatgtgccgaatcacccgcctggaggtaccgctcgtcgccgactggggggttgcccct
gagtgggatcatgcacataccccgatggggcgcgcaagtgtctggaagtaa
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