Sinimarinibacterium sp. NLF-5-8: GT972_11020
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Entry
GT972_11020 CDS
T06400
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GT972_11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_11020
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT972_11020
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT972_11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
DUF7130
ADDB_N
Zn_ribbon_RPAB4
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
QHS10613
LinkDB
All DBs
Position
2321325..2323484
Genome browser
AA seq
719 aa
AA seq
DB search
MLLISVALPVPLPRCFDYCVEPPLAAQIRRGCRVRVAFGARELVGVVVQAPFAAADDGAE
YRPIIALLDDAPLLGEELLSLCEWAARYYLFPLGEILHHALPGRLRQGQMAQIQSAEAYA
ITAAGRVALTTLSDRARAQKTLLTQLLAATQPRAALAATAATLKRARAQGWIEVAAEPLP
HAPDTAARPTPTAEQQAVLEQLAASHGFAVHLLEGVTGSGKTEIYLQRIEAVLAQGAQAL
VLVPEISLTPQLESRLRARLGDGVCAYHSTLTARAREQVWLRARAGRAQVIIGTRSALWL
PFARLGVIVVDEEHDTSYKQQEGFRYSARDVAVVRAQKNNIPVLLGSATPSLETLNHARS
GRYRHLRLSRRVHEVPPPKVQILDVRGLSLDHGLSAPLLEATAHHLQAGGQVLFFLNRRG
YAPVLLCHTCGWRAACAHCDAHMTLHRGRNVLRCHHCGAQQALPQTCPSCQTRTLLAIGT
GTERVEQALANRFPQYRVARFDSDRITSQQALQDQLADIRSGRAQILVGTQILAKGHDFP
NLSMVGIVSADQALYGSDFRAVERMGQLVTQVAGRAGRSGQPGAVWLQTHEPDHPYLQML
SEGGYRALSEALLDERRQTELPPFAYLALIRAEAREAQWPMQFLQAVQPLCQGAGVSVHD
ALPSGMERRAGFVRASLLLQARERRALHALLARAMPQISRLPLARKVRWSLDVDPYDLM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgatttcggttgccttgccggttccgctgccacgttgcttcgactattgcgtc
gaaccgccgctggcggcgcagatccggcgcggctgccgggttcgcgttgcgtttggcgcg
cgcgaactggttggcgtggtggtgcaagcgccttttgccgcggccgacgatggcgctgaa
tatcgcccgatcatcgccctgctcgatgacgcgccgctgctgggcgaagaactgctgtcg
ctgtgcgagtgggcggcacgctattacctgttccccctgggtgagatcttgcatcacgcc
ctgccgggccgcttgcgccaggggcaaatggcgcagatccagtctgccgaagcctatgcc
atcaccgcagcgggtcgtgttgcactgacgacgctcagcgatcgcgcgcgcgcgcaaaag
accttgctgacgcagttgctggccgcgacgcagccgcgcgcggcactggcggccaccgcc
gcaacgctcaaacgcgcgcgcgcgcagggctggatcgaagtcgccgcagagccgctgccg
cacgcgccggacactgcggcgcgccccacgcccacggcagaacagcaggcggtgctggaa
caactggccgcatcccacggatttgccgtgcacctgctcgaaggcgtcaccggcagcggc
aaaaccgaaatctatctgcaacggatcgaagcggtgctggcgcaaggcgcgcaagccctg
gtgctggtgccagagatcagcctgaccccgcaactggaatcacgcttgcgcgcgcgcctg
ggcgatggcgtctgcgcctatcactccacgctgacggcgcgcgcgcgcgaacaggtgtgg
ctgcgcgcgcgcgcggggcgcgcgcaggtgatcatcggcacgcgctcggcgctgtggctg
ccgtttgcacggctgggcgtgatcgtcgtcgatgaagaacacgacacctcttacaagcaa
caggaaggattccgctacagcgcgcgcgatgtggccgtggtacgcgcgcaaaaaaacaat
attccggtcttgctcggcagcgccacgccctcgctggaaacgctcaaccacgcacgcagt
ggccgctatcggcatcttcgcctcagccgccgcgtccatgaggtgcccccgcccaaagtg
cagatcctggatgtgcgcggcctgtcgctggatcatggcctgtccgcgccgctgctggag
gcaaccgcgcatcacttgcaggccggcggacaagtcctgttttttctgaaccggcgcggc
tatgccccggtgctgctgtgccacacctgcggctggcgcgcagcgtgcgcgcattgtgat
gcccatatgaccctgcaccgggggcgcaatgtgttacgttgccatcactgcggcgcacaa
caagcccttccacagacctgtccctcatgccagacccgcaccctgctggcgatcggcacc
ggcaccgagcgggtggaacaggcactggccaaccgctttccgcagtaccgggtcgcccgt
tttgattcagaccggatcaccagccagcaggccttgcaggatcagctggcggatattcgc
agcggccgcgcgcagattctggtgggcacgcaaatcctcgccaaaggccatgattttcca
aacctttcgatggtcggcatcgtcagcgccgatcaagccttgtatggcagcgattttcgc
gcggtggaacggatggggcagctcgtcacccaggtggccgggcgcgcggggcgcagcggg
caaccgggcgcggtgtggctgcaaacccacgagccggatcatccgtatctgcagatgctc
agcgaagggggctaccgcgcgctcagtgaggcattgctggatgagcggcgccagaccgag
ctgccgccgtttgcctatctggcgctgattcgcgccgaagcccgcgaagcgcagtggccg
atgcagtttttgcaggcggtgcagccgttgtgccagggcgccggggtcagcgtgcacgac
gccctgccttcggggatggagcgccgcgccggatttgtgcgcgcctcgctgctgctgcag
gcgcgcgaacggcgcgcgctgcacgcgctgctggcgcgcgcgatgccgcagatcagccgc
ctgccactggcgcgcaaggtgcgctggtcgcttgatgtcgatccttacgatttgatgtag
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