Sinimarinibacterium sp. NLF-5-8: GT972_11175
Help
Entry
GT972_11175 CDS
T06400
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03420
Nucleotide excision repair
sini03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT972_11175 (uvrD)
03430 Mismatch repair
GT972_11175 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_11175 (uvrD)
Enzymes [BR:
sini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT972_11175 (uvrD)
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT972_11175 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GT972_11175 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
QHS10642
UniProt:
A0A6P1UAF4
LinkDB
All DBs
Position
complement(2354286..2356544)
Genome browser
AA seq
752 aa
AA seq
DB search
MFEPVVDIAPLVAALNPAQRAAVTAPLEHRLVLAGAGSGKTRVLTHRIAYLIAAEGVSPL
SILAVTFTNKAAAEMRARIEQLIDVPIRAMWVGTFHGIAHRMLRMHFREAGLIQNFQILD
ADDQQRLVKRIIKGLDLADEQWPAKTVTGWINAQKEQARRPEQISDQGDYNQNQLVRIYS
AYQAACERQGVVDFAELLLRAYELCRDNRDIQAHYQRRFRHLLIDEFQDTNTLQYRWLRV
LAGASGVLFAVGDDDQSVYSWRGARVEHMLALSRDFVGCEVVRLEQNYRSTGTILKAANG
LIAKNSGRLGKNLWTDGSDGEPIQLYAAYNEYDEAEFVVSRIKAQVGSGARYDENAVLYR
MGAQSRVLEEMLIRARLPYRIYGGLRFFERQEIKDALAYLRLLHNRDDDSGFERVVNTPA
RGIGATTVERLRGFARAQGISLWQAAQIADEALGRSASKVKAFCALIETMAARAQDQLLS
KITEDVIVHSGLREHYGKEKSEQAEARLENLDELISATRAFELSALEAPIEGAPELDPLT
HFLTHAALESGEQQAAPGEDCVQLMTLHAAKGLEFRFVFLVGMENGIFPHARAVDEGNLE
EERRLCYVGITRARQQLYMSYAELRRLHGIEQIGMPSQFLRELPPETLQELRPRVNVSRP
AFAAAGSAEVGAARAWRNASDAPERTHLPGNMRAQEAAGFGFALGARVRHERFGEGTVLQ
FEGDGERTRIQIKFAQTGTKWLMLSMANLVAV
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaccggtcgtggatattgccccgctggtggcggcgctcaaccctgcacagcgc
gctgccgtcaccgcgccgctggaacaccggctggtgctggcgggcgccggttcgggcaaa
acccgtgtcctcacccaccggattgcctatctgattgcggcagaaggtgtctcgccgctg
tcgattctggccgtcaccttcaccaacaaggccgccgccgagatgcgcgcgcgcatcgaa
cagctcatcgacgtgccgatccgcgccatgtgggtcggcacctttcacggcatcgcccac
cgcatgctgcggatgcacttcagggaagccgggctgatccagaactttcagattctggat
gccgacgatcagcagcggctggtcaagcgcatcatcaaaggactggatctggccgacgag
caatggccggccaagaccgtcaccggctggatcaatgcgcaaaaagaacaggcacgccgc
cctgaacagatctcggaccagggcgactacaaccagaaccagctggtgcggatctacagc
gcctaccaggccgcgtgtgaacgtcagggcgtggtggactttgccgaactgctgctgcgc
gcctacgaactgtgccgtgacaaccgcgacatccaggcgcattaccagcggcgtttccgc
catctgctgatcgacgagtttcaagacaccaacaccttgcaatatcgctggttgcgggtg
ctcgccggtgccagcggcgtgctgtttgccgtcggcgacgacgaccaatcggtgtattcc
tggcgcggcgcgcgcgtcgaacacatgctggcgctgagccgtgattttgtcggctgtgaa
gtggtgcggctggaacaaaactaccgctccaccggcaccatcctgaaagcggccaacggc
ctgattgccaaaaacagcggtcgcctcggcaaaaacctgtggaccgacggcagcgatggc
gaaccgatccagctttacgccgcctacaacgaatacgacgaagccgaatttgtcgtttcg
cggatcaaggcgcaggtcggcagcggcgcgcgctacgacgaaaatgccgtgctctaccgt
atgggcgcgcagtcgcgggtgctggaagaaatgctgatccgcgcgcgcctgccctatcgg
atttatggcggtctgcgcttttttgaacggcaggaaatcaaggacgcactggcgtatttg
cgcctgttgcacaaccgcgatgatgacagcgggtttgagcgcgtcgtcaacaccccggcg
cgcggcattggtgctaccacggtcgagcggctgcgcggttttgcgcgcgcgcaagggatc
tcgttatggcaggccgcccagatcgccgatgaggcgctggggcgttcggccagcaaggtc
aaggccttttgcgcgttgatcgagaccatggcggcgcgcgcgcaagaccagttgctgtcc
aaaatcaccgaggacgtgatcgtccacagcgggctgcgcgagcactacggcaaggaaaaa
tccgagcaggccgaagcgcgccttgaaaacctcgatgaactgatcagcgccacgcgcgcg
ttcgagctgtcggctctggaagcgccgatcgaaggggcgccggaactcgatccgctgacc
catttcctgacccacgcggcgctggaatccggcgaacaacaggccgcacccggcgaggat
tgcgtgcaattgatgacgctgcatgccgccaaggggctggagttcaggtttgttttcctg
gtgggcatggaaaacggtatttttccccacgcgcgcgcggtggatgaaggcaatctcgaa
gaagaacgacgtctgtgttacgttggaattacgcgcgcacgacaacagctatacatgagt
tatgccgaactgcggcgtttgcatgggatcgaacagatcggcatgccctcgcagtttttg
cgtgaactgccgccggaaaccctgcaagaactgcggccgcgcgtcaacgtcagccgccct
gcgtttgccgccgccggctccgccgaagttggagccgcgcgcgcgtggcgcaacgccagc
gacgcccctgagcgcacccatctgcccggcaacatgcgcgcgcaggaggcggccgggttt
ggctttgcgctgggcgcgcgcgtgcgtcatgaacgctttggagaaggcaccgtcttgcag
tttgagggcgacggcgagcgcacccggatccagatcaagtttgcccagaccggcaccaaa
tggttgatgctgtcgatggccaatctggtcgccgtttga
DBGET
integrated database retrieval system
