Sinimarinibacterium sp. NLF-5-8: GT972_11545
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Entry
GT972_11545 CDS
T06400
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03030
DNA replication
sini03430
Mismatch repair
sini03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT972_11545 (dnaN)
03430 Mismatch repair
GT972_11545 (dnaN)
03440 Homologous recombination
GT972_11545 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sini03032
]
GT972_11545 (dnaN)
03400 DNA repair and recombination proteins [BR:
sini03400
]
GT972_11545 (dnaN)
Enzymes [BR:
sini01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT972_11545 (dnaN)
DNA replication proteins [BR:
sini03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GT972_11545 (dnaN)
DNA repair and recombination proteins [BR:
sini03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GT972_11545 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Nore1-SARAH
DUF6375
Motif
Other DBs
NCBI-ProteinID:
QHS10709
UniProt:
A0A6P1UBW3
LinkDB
All DBs
Position
complement(2425067..2426167)
Genome browser
AA seq
366 aa
AA seq
DB search
MKLQVGRNELLSALSAVIGVVEKRQTLPVLSNFLLILNDNELTVIGTDLEIELRARAQVQ
NLQSGTATVPARKLFDICRALPEGAEISIQIENDKALIKSGRSRYSLACLRADDFPSMER
TNEGQHIDIPQKILKSLIEKTQFAMAQQDVRYYLNGMLLEVDSARIRTVATDGHRLALSE
VAIESGISERIQIIVPRKAVQELQRLLDQTENTIKLTLSNGQIEANLDVIHLTSKSIEGR
FPDYERVVPTGGAICIDGDRETVRRALARAAILSSEKIRGVHISLSADKLKLETQNPDQE
QAEEEVEVSYSGEPIEIGFNVNYLLDALSALDSERFIMQLKDADSSSLIHAVDDTSSKYV
VMPMRI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcaagttgggagaaacgagctgctgtcagctttgtcagccgtcatcggtgtt
gttgaaaaacggcaaacgttgccggtgctgtccaattttttactgatcctcaacgacaac
gaactcaccgtgatcggcaccgatcttgagatcgagcttcgcgcgcgtgcacaagtgcaa
aatcttcaatccggaaccgccacagtcccggcacgcaaactgttcgacatctgccgtgca
ttgcctgaaggcgctgaaatctcgatacagatcgaaaacgacaaagccctgatcaaatca
ggtcgcagccgctattcactggcctgtctgcgtgccgatgattttccttcgatggagcgc
acaaacgaagggcaacatattgatattcctcagaaaatattaaaatcgctgattgaaaaa
acgcagtttgcaatggcgcagcaagatgttcgctactatctcaatggcatgctgctggaa
gtggacagcgcgcgcattcgcaccgtggccactgacggtcaccgcctggctttgagtgag
gtggcaattgaaagcgggatcagcgaacgcatccagatcatcgtgccgcgtaaagccgtg
caagaattgcagcgtttgcttgatcaaaccgaaaataccatcaaactgacgttgagcaac
ggccagattgaagccaaccttgacgtgatccatctgacctcaaagtcaatcgaaggccgt
tttcccgattacgagcgcgtggtgccaaccggtggcgcgatctgcattgacggtgatcgg
gaaacggttcggcgcgctttggcgcgcgcagcaattctgtcttccgaaaaaattcgcggc
gttcatatttcgctgtcggccgacaaactcaagctggaaacccaaaacccggatcaggag
caggctgaagaagaagtcgaagtcagctattccggtgaaccgattgaaatcgggtttaac
gtcaattatttgctcgatgcgctcagtgccctggacagtgagcggttcatcatgcagctc
aaggacgccgattccagcagcctgatccacgctgtagatgacaccagcagcaaatatgtc
gtgatgcctatgcggatctga
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