KEGG   Sinimarinibacterium sp. NLF-5-8: GT972_11580
Entry
GT972_11580       CDS       T06400                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sini  Sinimarinibacterium sp. NLF-5-8
Brite
KEGG Orthology (KO) [BR:sini00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sini02048]
    GT972_11580
Enzymes [BR:sini01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GT972_11580
Prokaryotic defense system [BR:sini02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    GT972_11580
SSDB
Motif
Pfam: Cas3_HD DEAD ResIII AAA_16 HD AAA_22 Peripla_BP_4 PhoH AAA_19
Other DBs
NCBI-ProteinID: QHS10716
UniProt: A0A6P1UD56
LinkDB
Position
2432187..2433581
AA seq 464 aa
MIGGDAVLPRKKASNAAAIESIDYAQCPAKTWLREDGKTQLGRTVIEHCQIVGEVARAMI
ARYPQTLQARLFPDDAAFAAASHDIGKVSPFFVEKLLRACSPEHQTLATLGVNPALEKDW
GGHAGVSQVAAAAMNAPEWVPQILGQHHGFTPPLSGRRADAEVFGGVAWQEQRDALVKDL
KQRLKMDWPEIASVEQARLVAGLTSVADWIGSGRFFENPNQPWQASIAQALDDAGFIQPR
YRAGLSFSQVFGFDPRPAQVQLIDAAQSPGVYVLEAPMGMGKTEAALYVAYQMLEKGEAS
GVYFALPTQLTSNKIYQRFNDFLSAVLHPDDTHRALLLHGSAWLLDTEMGEEGRPGGAWF
NHAKRGLLAPFAVGTIDQALMAAMHVKHGFVRAFGLAGKVVILDEVHSYDAYTGTLLDAL
VHLLRRLHCTVIMTLPLFRVALNPRFTRPFYAVPRTSAARTASG
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgattgggggagatgctgtgctgccaagaaaaaaggcatccaacgcggctgctattgag
tccattgactacgcccagtgtccggcgaaaacgtggctcagagaggatgggaaaacccaa
ctggggcgaacggttattgagcattgtcagattgtgggcgaagtcgcgcgcgcgatgatc
gcgcggtatccacagacattacaggcgcggctgtttccagacgatgcggcgtttgcggct
gcgagtcatgacattggtaaggtcagtccgttttttgtggaaaaactactgcgcgcgtgc
agtccagagcatcaaactttggcaacacttggcgttaatccagcgcttgaaaaagattgg
ggtggtcatgcgggcgtcagccaagtggcggccgcagcaatgaacgcccctgaatgggtt
ccgcagattctggggcaacaccacggatttaccccgcccctttcgggacggcgcgccgat
gccgaagtgtttggaggcgtggcctggcaagaacagcgggatgccttggttaaagactta
aagcagcggctgaaaatggattggccagagattgcctcggttgaacaagcacgattggtt
gccgggctgacttcagtggccgattggattgggtctgggcggttttttgaaaaccctaac
cagccttggcaagcaagcattgcacaggcattggatgacgcagggtttattcagccgcgc
taccgcgcggggttgagcttttcgcaggtatttggctttgacccaagaccggcacaagtc
cagctcattgatgctgcacagtcaccgggtgtttacgtcttggaagccccgatggggatg
ggtaaaaccgaagcggcactttatgtcgcttaccaaatgctggaaaaaggagaagccagc
ggtgtttatttcgccctgccgacgcaactcacctcaaacaaaatctatcagcgtttcaat
gattttttgagcgctgtattacatccagatgacactcaccgcgcgctgttgttgcatggt
tctgcgtggttgctcgataccgaaatgggggaagaagggcgtcctggtggcgcatggttt
aatcacgccaaacgagggctgttagcgccttttgctgtaggaacaattgaccaggcattg
atggcagcgatgcacgtcaaacatggttttgtgcgcgcgtttggcttggcaggcaaggtt
gtgatccttgatgaagtgcacagttatgatgcctacaccggtacgctgctggatgcattg
gttcatttgcttcggcgcttgcattgcaccgtcattatgaccttgcccctgtttcgtgta
gctcttaacccacggttcacgcggcctttttacgctgtgcctcgtaccagcgctgctcgt
actgcatcgggctga

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