Sinimarinibacterium sp. NLF-5-8: GT972_12315
Help
Entry
GT972_12315 CDS
T06400
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini00730
Thiamine metabolism
sini01100
Metabolic pathways
sini01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GT972_12315 (thiC)
Enzymes [BR:
sini01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GT972_12315 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QHS10847
LinkDB
All DBs
Position
2579357..2581246
Genome browser
AA seq
629 aa
AA seq
DB search
MHAVADQIVEKAGELSAEVRRPFPASRKIYVQGPGGVRVPMREVSLTATRSSNGLEPNPP
VTLYDTSGVYTDPDVQIDLRAGLAPLRAPWIEARADTEQLRGPSSIYGRIRAADDQTVGL
RFEHIRPPRKAKAGANVSQMHYARKGIITPEMAFIAVRENARLQELRATYEQAGYLRRSH
RGERFGAQLPDEVTAEFVRDEVARGRAIIPANINHPELEPMIIGRNFRVKVNANIGNSAV
TSSIAEEVEKMVWSTRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVGG
KAEELSWEIFRDTLVEQAEQGVDYFTIHAGVLLRYIPWTAARTTGIVSRGGSIMAKWCLA
HHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGCIADANDDAQFGELHTLGELTHIAWK
HDVQTMIEGPGHVPLQLVKENMDEQLKHCMEAPFYTLGPLTTDIAPGYDHITSGIGAANI
GWYGCAMLCYVTPKEHLGLPDKNDVREGIVTYKIAAHAADLAKGLPGAQVRDNALSKARF
EFRWEDQFNLGLDPEKAREFHDQTLPQEGAKTAHFCSMCGPHFCSMKITQDVRDYAAQTG
ASEADALAQGMAEKAEEFRRAGAEVYQSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctgtagccgatcagattgttgaaaaagccggtgagttgtctgccgaggtgcgg
cggccatttcccgccagccgcaagatttatgtgcaagggccgggcggcgtgcgcgtgccg
atgcgcgaggtgtctttgaccgccacccgcagcagcaatggcctggagccgaatccgccg
gtgacgctgtacgacacctctggcgtgtataccgatcccgacgttcaaattgatctgcgt
gcaggcttggcaccgctgcgcgcgccgtggattgaagcgcgcgccgataccgagcaactg
cgcgggccgagttccatttatggccgcatccgcgccgctgacgatcaaaccgtggggctg
cgttttgaacacatccgcccgccgcgcaaggccaaagcgggcgccaatgtttcgcaaatg
cactacgcgcgcaaaggcatcatcacgccggagatggcgttcatcgccgttcgtgaaaac
gcgcgtttgcaggagttgcgcgcgacgtatgagcaagcgggctatttgcgccgcagccat
cgcggcgaacgctttggcgcgcagttgccggatgaagtcaccgccgagtttgtgcgtgat
gaagttgcgcgcggccgcgccatcatccccgccaacatcaaccaccctgagctggagccg
atgatcattggccgcaactttcgggtcaaagtcaacgccaacatcggcaactccgccgtc
accagcagcattgccgaagaagtcgaaaaaatggtgtggagcacgcgctggggcggcgac
acggtgatggatttgtccaccggcaaacacattcacgaaacccgcgaatggattttgcgc
aactcccccgtgcccatcggcaccgtgccgatttatcaagcgctggaaaaggtgggcggc
aaggccgaagaactgagctgggaaatcttccgcgacaccctggttgagcaggccgagcaa
ggcgtggactacttcaccatccacgccggcgtgctgctgcgctacatcccgtggacggca
gcgcgcaccaccggcatcgtctcgcgcggcggcagcatcatggccaaatggtgcctcgcc
catcacaaggaaaacttcctttacacgcactttgaagacatctgcgaaatcatgaaggcg
tatgacgtcagcttcagccttggcgacggcctgcgccccggctgcattgctgatgccaac
gacgacgcccagtttggcgaactgcacacgctcggcgaactgacccacatcgcctggaaa
cacgacgtgcaaaccatgatcgaaggccccggccatgtgccgctgcaactggtcaaggaa
aacatggacgagcagctcaagcactgcatggaagcgccgttttacaccctgggcccgctg
accaccgacatcgcccccggctacgaccacatcaccagcggcatcggcgccgccaacatc
ggctggtacggctgcgccatgctgtgttacgtcacccccaaagagcatctggggctgccc
gacaaaaacgacgtgcgcgaaggcatcgtcacctacaaaatcgccgcccacgccgccgac
cttgccaaaggcctgcccggcgcgcaggtgcgcgacaacgcactcagcaaggcccgcttc
gagttccgctgggaagaccagttcaaccttggccttgacccggaaaaagcgcgcgaattt
cacgaccagaccctgccgcaagaaggcgccaaaaccgcgcacttttgctccatgtgcggc
ccgcatttttgcagcatgaaaatcacccaagacgtgcgcgactacgccgcccaaaccggc
gccagcgaagccgacgccctggcacaaggcatggccgaaaaagccgaggagtttcgacgc
gcaggtgcggaggtttatcagtcggcgtag
DBGET
integrated database retrieval system
