Sinimarinibacterium sp. NLF-5-8: GT972_13350
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Entry
GT972_13350 CDS
T06400
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GT972_13350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sini03019
]
GT972_13350
Messenger RNA biogenesis [BR:
sini03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GT972_13350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
QHS11584
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Position
2790395..2790904
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AA seq
169 aa
AA seq
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MIDFDGFRPNVGIVLSSAKGQLLWAKRIRQNAWQFPQGGIQRGETPEDALYRELHEELGL
REQHVEVLGVTTGWLRYRLPSHYLRYGRGRLCIGQKQKWFLLRLLGEESAVDFNVTDKPE
FDGWRWVDYWDPMNEVVEFKRGVYWRALNELAPLMGVEPRAVRHRRRSL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgattgattttgatggatttaggccgaatgtcggaatcgtgctgagcagcgcgaaagga
cagcttttatgggccaagcgtattcgccagaatgcctggcagtttccccagggcgggatt
cagcgcggtgaaacacccgaggatgcgttgtatcgcgagctgcacgaagagctgggcttg
cgtgaacagcatgtcgaggtgctgggcgtgaccacgggttggttgcgctatcgcttgccc
agccactatctgcgctatggccgtgggcggctgtgtattggtcagaagcaaaagtggttt
ttgctgcgcttgctgggagaggagtcggcggtggatttcaatgtcaccgacaagcccgag
ttcgacggttggcgctgggtggattattgggatccgatgaatgaggtggtggagttcaag
cgtggcgtgtactggcgcgcgctcaatgagctggcgccgctgatgggcgtggagccgcgc
gcggtgcgccatcgtcgccggtcgttgtag
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