Sulfitobacter indolifex: DSM14862_00056
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Entry
DSM14862_00056 CDS
T08028
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM14862_00056 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinl03019
]
DSM14862_00056 (cca)
Enzymes [BR:
sinl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DSM14862_00056 (cca)
Messenger RNA biogenesis [BR:
sinl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DSM14862_00056 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UOA17311
LinkDB
All DBs
Position
cDSM14862:complement(60468..61628)
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AA seq
386 aa
AA seq
DB search
MIPADTRWLHDEDAQQVCRVVQDGGYRIYFVGGCVRDALLGLPDSDVDLSTDAPPETVMA
LARAAGVKAVPTGIDHGTVTLVAGGKPFEITTFRRDVETDGRRAVVAFSSDIAEDARRRD
FTMNALYATPDGQVLDPLGGLPDLHARRLRFIENAEQRIREDYLRTLRYFRFMAWYGSPQ
VGPEPDALDAIASNLDGLETLSAERVGQEFRKLLRASDPAPALALMRQTGALPVLLPGSD
DRWISMLVHFEHALGLTPDWLVRLAALGGEGLTDRLRLSKVEVKRLALLQEHGFAGPPLS
ELAYRHGAEVAQAAALLRGCMAEQMPENAVLETISRTAQARFPVSAKDLMPKFKGPELGC
ELARLEQLWIASGFTLSRAELLSESS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattccagccgacacgcgatggttacatgatgaagacgcgcagcaggtttgccgcgtc
gtgcaggatgggggatatcgcatctattttgtcggcggctgcgtgcgtgatgcgctgcta
ggcctgccggacagcgatgtagatctctccacggacgccccccctgaaacggtgatggcg
ctggccagggcggccggggtcaaggccgtgccgaccgggattgatcatggcacggtgacg
cttgtcgcggggggtaagccctttgagatcaccacttttcgccgtgatgtcgagacggat
ggccgccgggctgttgttgccttctcatccgatattgcagaagacgcgcggcgccgtgat
ttcacaatgaacgcgctttacgccacgccggacggacaggtgcttgacccgctggggggg
ctgcctgaccttcatgcgcggaggttgcgctttatcgagaatgcagagcagcgtattcgc
gaagattatctgcgtaccctgcgctattttcgtttcatggcttggtatggcagcccgcaa
gtggggccagagcctgatgcactcgacgcaatcgcgtcgaatttggacgggttagagaca
ctttcggcagagcgtgtggggcaggaatttagaaagctgctgcgcgcgtctgatcctgcc
ccggcgttggcgttaatgcgccaaactggcgctttgccagtgctcctgccgggcagcgat
gaccgctggatatctatgctggttcattttgagcatgcactgggtcttaccccagattgg
ctggtccgtctggctgcgttgggcggcgaaggactgactgaccgtttgcggctgagcaag
gttgaggtgaagcggctcgcgttgctgcaggaacatggatttgcgggaccgccactctca
gagcttgcgtatcggcatggggcagaagtggcacaggccgcggcgctattgcggggatgt
atggcagagcagatgcccgaaaatgcggtgttagagacgatcagtcgcacggcacaagcg
cggtttcccgtatcggccaaagatttgatgccgaaatttaagggtccggaattggggtgt
gagcttgcccggttagagcaactttggatcgcctctggtttcaccctgtctcgcgcagaa
ttgctaagcgaatccagctag
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