Sulfitobacter indolifex: DSM14862_00183
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Entry
DSM14862_00183 CDS
T08028
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinl03016
]
DSM14862_00183 (rnd_1)
Enzymes [BR:
sinl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DSM14862_00183 (rnd_1)
Transfer RNA biogenesis [BR:
sinl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DSM14862_00183 (rnd_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UOA17438
LinkDB
All DBs
Position
cDSM14862:complement(193244..193888)
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AA seq
214 aa
AA seq
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MPCKRGIDDLMTNFLYQNDLPDDLDLGPMVAIDCETMGLHPHRDRLCVVQLSGGDGHAHL
VQIAKGQTEAPNLCALLENPHVLKLFHYGRFDIAAMLNAFGATAAPVYCTKIASRLIRTY
TDRHGLAKLCQELLSVDISKQQQSSDWGAKELTQAQIDYAASDVLYLHRLRDELNKRLIR
EGRMDMAQACFDFLPMRARLDLEGWPDTDIFAHA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgcaagcgcggtatagacgacctcatgacaaatttcctctatcagaacgacctg
ccggatgacctcgacctcgggccgatggttgccattgactgcgaaacgatggggctgcat
ccgcaccgtgatcggctgtgcgttgtgcagctgtcgggcggcgatggtcatgcgcatctc
gtgcagattgccaaaggccagaccgaagcgccgaacctctgcgcgctgttggaaaatcca
catgtgctgaagctgtttcattatggccgttttgacattgccgcgatgctgaacgccttt
ggcgccaccgcagcaccagtctattgcaccaagatcgccagccgtttgatccgtacctat
acggatcggcacgggctggcgaagctctgtcaggaactactgagcgtggatatctccaaa
cagcaacaatccagcgactggggggccaaagagctgacccaagcgcagatcgactatgcc
gcgtcagatgtgctttacctgcaccgtctgcgcgatgaacttaacaaacgcctgatacgc
gaaggccggatggacatggcgcaggcctgtttcgatttcctgccgatgcgcgcccggctt
gatctggagggatggccggacacggacatcttcgcacacgcatga
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