Sulfitobacter indolifex: DSM14862_00242
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Entry
DSM14862_00242 CDS
T08028
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinl03032
]
DSM14862_00242 (hup)
03036 Chromosome and associated proteins [BR:
sinl03036
]
DSM14862_00242 (hup)
03400 DNA repair and recombination proteins [BR:
sinl03400
]
DSM14862_00242 (hup)
DNA replication proteins [BR:
sinl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSM14862_00242 (hup)
Chromosome and associated proteins [BR:
sinl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSM14862_00242 (hup)
DNA repair and recombination proteins [BR:
sinl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSM14862_00242 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UOA17493
LinkDB
All DBs
Position
cDSM14862:complement(248970..249257)
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AA seq
95 aa
AA seq
DB search
MAKPMTKTQLVAALAEEMDTDKKSAGAALDAVCNLITREVSAGGAVTLPGVGKIYCRERP
ERMVRNPATGEQFKKDADKVVKMTIAKALKDSVNE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccgatgaccaagacccagctcgtcgccgcactggcagaagagatggacaca
gacaagaaatccgcaggcgcagcgctcgacgccgtttgcaacctgatcacccgtgaagtg
tccgccggcggtgccgtgaccctgccgggcgttggcaaaatctattgccgtgagcgcccc
gagcggatggtccgcaaccccgccacgggcgagcagttcaagaaagacgccgacaaagtg
gtcaagatgaccatcgcgaaggcgctgaaggacagcgtaaacgagtga
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