Sulfitobacter indolifex: DSM14862_00428
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Entry
DSM14862_00428 CDS
T08028
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinl03016
]
DSM14862_00428 (truB)
Enzymes [BR:
sinl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSM14862_00428 (truB)
Transfer RNA biogenesis [BR:
sinl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSM14862_00428 (truB)
Prokaryotic type
DSM14862_00428 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UOA17677
LinkDB
All DBs
Position
cDSM14862:complement(434550..435476)
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AA seq
308 aa
AA seq
DB search
MARKRKGRDISGWLVVDKPAGPTSTAVVNKVRWALEAKKAGHAGTLDPEATGVLAIALGE
ATKTVPYITDALKAYEFTVRLGISTNTDDAEGEVIGTSDLRPDDAAIKDALSDFIGDIQQ
VPPQFSAVKIDGQRAYKRARDGEEMDIAARPLWVESLLLLDRPDADHVTLEMVCGKGGYV
RSIARDLGQKLGCLGHVRELRRTWSGPFEASNALTLAQIDEIARTPELDTHLLPLAEGLV
ELPEVKATPEGATRLRNGNPGMVIAHDVEYGDECWASLDGQPVAVGRFKAGELHPSRVFN
LSSDTNEG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggtcgcgatatttccggctggctggttgtagataaacccgct
ggaccgacatcgaccgccgtggtcaacaaggtccgctgggcgcttgaagcgaaaaaggca
ggccacgcgggcacgctggaccctgaagccaccggcgttctggccatcgccttgggcgaa
gcgaccaagaccgtgccctacatcactgacgcgctcaaagcttatgagtttaccgtgcgt
ttggggatttccaccaacaccgacgacgccgagggcgaggtcatcggcacttccgacctg
cgccccgacgatgcggcgattaaggatgcgctgagcgatttcatcggggacatccaacaa
gtcccgccacagttctctgccgtgaagattgacggtcagcgcgcctataaacgcgcccgc
gacggcgaagagatggacatcgccgcgcgtccgctctgggtggaaagcctgctgctgctc
gaccggcccgatgcggatcacgtcacgcttgagatggtctgcggcaagggcggctatgtc
cgctccatcgcccgcgatctggggcaaaaacttggctgcctcggccacgtccgcgagctg
cgccgcacatggtctggcccgtttgaggcctcgaatgccctgacactggcacagatcgac
gagatcgcccgcacgccagaactcgacacgcatctgctgccgctggccgaaggattggtt
gagttgcccgaggtcaaagccacccccgaaggcgcgacgcgcctgcgcaacggcaacccc
ggcatggtaatcgcccatgacgtggaatacggcgatgaatgctgggcctcgctggacggt
cagcccgtcgccgtgggccgcttcaaagcaggcgagttgcaccccagccgggtcttcaac
ctatcttcggacacgaacgagggctaa
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