Sulfitobacter indolifex: DSM14862_00434
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Entry
DSM14862_00434 CDS
T08028
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinl03009
]
DSM14862_00434 (rsmB_1)
Enzymes [BR:
sinl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DSM14862_00434 (rsmB_1)
Ribosome biogenesis [BR:
sinl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DSM14862_00434 (rsmB_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
MTS
FtsJ
Methyltransf_23
Methyltransf_37
Methyltransf_11
Methyltransf_15
Cons_hypoth95
TehB
Motif
Other DBs
NCBI-ProteinID:
UOA17683
LinkDB
All DBs
Position
cDSM14862:438487..439758
Genome browser
AA seq
423 aa
AA seq
DB search
MADTGVQARRSAVYLLDMILDDEPRLMSELLASGALDKLPPDDRARAQRLAQDTLRGLER
ADRLLQKHLQKAPPLTVRNVLRVGTVELCQGGAAHGVVNAMVNLVSQHRTLSHLKGLTNA
VLRKIAAQGPEAWDALRAPRLPKWLRGPLAEAWGTDAIAAMEEAHFAGAPLDLTAKGDAS
ALAEAVGGTLLPTGSVRVMNAGQVSAMPGFAEGDWWVQDAAAAIPVRVLAPKEGERVLDL
CAAPGGKTMQLAAAGAEVTAVDQSHPRMQRVKENLTRVGLKAKTLTKDARAVQGEFDAIL
LDAPCSATGTIRRHPDLPHAKDGSEFGDLIELQSELIDHAWSLLKPGGRLVFCTCSLLPD
EGEVQVDEALERHGDMTVDRAALDVAGVEAAWITEEGGLRLRPDFWADKGGMDGFYIACL
RKG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaggcgttcaggcccgcagaagcgcagtatatctgctggatatgatcttg
gacgatgagccgcggctgatgtccgagcttttggcatctggcgcgctggacaagctgccc
cctgatgatcgcgcccgtgcgcaacgtttggcgcaggacaccctgcgcgggttggaacgc
gccgaccggctgttgcaaaagcacctgcaaaaggccccgccgctgacggtgcgcaatgtg
ctgcgcgtcggcacggtggagttgtgtcagggcggcgcggcgcatggggtcgtgaatgcg
atggtgaacctcgtctcgcaacaccgcacgctgagccatctcaaagggctgaccaacgcg
gtgctgcgcaagatcgcggcacagggaccggaggcatgggacgccctgcgcgcgccgcgc
ttgcccaaatggctgcgtggtccgctggcagaggcttggggcacggacgccatcgccgcg
atggaagaggcgcattttgctggcgcaccgcttgatctaaccgccaagggcgatgcgagt
gctttggccgaggccgtaggcggtacgctcctgcccacgggatcggtgcgcgtgatgaac
gccggtcaggtctctgccatgcccggctttgcggaaggcgactggtgggtgcaggatgcc
gctgccgcgattccggtccgggtgctggcgcctaaagagggcgaacgtgtgctggacctt
tgcgccgcgccggggggcaagaccatgcagcttgccgctgcgggcgctgaagtcaccgcc
gttgaccaatcgcatccccgtatgcagcgggtgaaggaaaacctgacccgcgtgggcctc
aaggctaagacgctcaccaaagatgcgcgtgctgtgcagggcgagtttgacgcgatcctg
ctggatgcgccgtgctctgccactggcaccatccgccgccacccagatctgccccacgcc
aaggacggatcggaatttggtgaccttatcgagttgcagtcagagctgatcgaccacgcg
tggagcctgctcaaacccggcgggcggttggtgttctgcacctgtagcctgctgcccgat
gaaggcgaagtgcaggtcgacgaggcgctagagcggcatggtgacatgacggtcgaccgc
gccgcgttggacgtggccggggtcgaggcggcgtggatcaccgaagaaggcggcctacgc
ctgcggcctgatttctgggccgacaaaggcgggatggacgggttctatatcgcctgcctg
cgcaaaggctga
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