Sulfitobacter indolifex: DSM14862_01413
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Entry
DSM14862_01413 CDS
T08028
Symbol
appA_2
Name
(GenBank) Oligopeptide-binding protein AppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM14862_01413 (appA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinl02000
]
DSM14862_01413 (appA_2)
Transporters [BR:
sinl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSM14862_01413 (appA_2)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UOA18641
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All DBs
Position
cDSM14862:complement(1432470..1434200)
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AA seq
576 aa
AA seq
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MYGEPDLPSDFSALPYVNADAPKGGAIVLGNTGGFDSLNPFVRKGTAPWQLPHFTHETLM
GRSWDEPFALYGLLAETIEVPDDRSWVEFTLREEARFSDGSPVTVEDVIFSFELLGSEGH
PRYHGLRQQIDTIEQTGPRSLRMTFNSDNRELALLAGMRPILSKAQWEGQDFANAPLEEF
PLGTGPYVISDYQAGRHVTLTRNPDYWGAEVPFRQGTHNYDEVKIDFYGDANVLFEAFKA
GQISAVREFNAETWATQYNFPAIARGEVLKSTFPHSKPSGMTGFVMNSRRAPFDDWRVRD
ALISAFNFEYINETLTGGALPRITSYFSNSDLAMRDGPATGRVFDLLADYADTLPPGTVD
GYTLPVADGSVRNRSGIRAAMQQLNAAGYKAEGGMMHRADGTPLTFTILLSKGSRENLAI
AELYTQSLKRLGITAQIETVDDAQFVARQNEYDFDMTFFRRSLSLSPGTEQRFYWGSEAA
DQPGTRNLMGVRSPAVDAMIDQMLQARESADFVAATRALDRILTAGRYVIPFWQFDEGLI
AHDARMAYPDEIPLYGDGPNFMPEVWWWKPAETSDQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggaacctgatctgccctcggatttcagcgccctgccttatgtgaacgccgac
gcgcccaaaggcggtgcgattgttttgggcaatacggggggattcgacagcctcaacccc
ttcgtgcgcaaaggcacagcaccttggcagttgccgcatttcacccatgagaccttgatg
gggcgctcatgggatgagccatttgccctttacggcctgctggccgaaaccattgaggta
cccgacgaccgctcatgggttgagttcaccctgcgcgaagaagcgcggttttccgatggc
agcccggtgaccgttgaagatgtcatcttttctttcgagcttttgggaagtgaaggccac
ccgcgctaccacgggctgcgccaacagattgataccattgaacaaaccggcccgcgcagc
ctgcgcatgacctttaacagcgacaaccgcgagcttgccctgctggctgggatgcgccct
attctcagcaaagcgcaatgggaaggtcaggacttcgccaacgcgcctctggaagagttc
ccgctgggcaccggcccctatgtcatcagcgactatcaggcaggccgccacgtgaccctg
acgcgcaaccccgactactggggcgctgaggtgccattccgccaaggcacgcataactac
gacgaggtcaaaatcgacttctacggcgatgccaatgtgttgttcgaagcgttcaaggct
ggccagatctcagccgtgcgcgaattcaacgccgagacttgggccacgcaatacaacttc
cccgccattgcgcgtggcgaagtgttgaaatccaccttcccacacagcaaaccctcaggc
atgaccggctttgtcatgaactcccgccgtgcgccttttgacgattggcgggtgcgcgat
gcgctgatctcggctttcaattttgagtatatcaacgagacgcttacaggcggcgccttg
ccccggatcacctcttatttctcgaactccgacctcgccatgcgcgacgggcccgcgacg
ggccgggtctttgacctgctggcagactatgccgatacgctgccaccgggcaccgtggat
ggctatacgctgcccgtggccgacggttcggtccgcaaccgctcgggcatccgtgcggcg
atgcagcaacttaacgcggcaggctataaggccgaaggcggtatgatgcatcgcgccgat
ggcacgccgctgaccttcaccattctactatccaagggcagccgcgaaaacctagcgatt
gcagagctttacacgcagtcgctaaagcgacttgggatcacggcacagatcgaaacggtc
gatgacgcgcaatttgtagcacggcaaaatgaatacgacttcgacatgaccttcttccgg
cgctccctttcgctcagtcccggcacagagcagcgcttttactgggggtcagaggccgcg
gatcaacccggcacgcgcaacctcatgggggtccgttctccggccgtagatgcgatgatt
gatcagatgctacaggcccgcgaaagcgctgactttgtcgctgccacacgtgcgctggac
cgtatcctgacggcggggcgctatgtcattcccttttggcagttcgacgaggggctgatc
gcccatgacgcgcggatggcctatccggacgaaattccgctttatggcgatgggccgaac
tttatgcccgaagtctggtggtggaaaccggcagagacctcagaccagtga
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