Sulfitobacter indolifex: DSM14862_01555
Help
Entry
DSM14862_01555 CDS
T08028
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sinl
Sulfitobacter indolifex
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinl03400
]
DSM14862_01555 (phrA)
Enzymes [BR:
sinl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DSM14862_01555 (phrA)
DNA repair and recombination proteins [BR:
sinl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DSM14862_01555 (phrA)
Prokaryotic type
DSM14862_01555 (phrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UOA18778
LinkDB
All DBs
Position
cDSM14862:complement(1579395..1580852)
Genome browser
AA seq
485 aa
AA seq
DB search
MFRGQARSKTPNVSENAPLIVWFRRDLRLSDHPALAAACKTGRPVIPLFIHDNQSDALGA
APKFRLGLALACLGDTLKEKGSRLILRRGDALDVLRDVIEQTGAGAVYWSRLYDPAAIDR
DTKVKDALKEDGVEACSFAGHLMFEPWTVETKTGGFYKVFTPYWKSVRGRDVAEPLATPS
EIRAPEDWPDSDVLDDWQMDAEMQRGRDVVRPYVRLGEAAAQARLGSFIADIVDGYDESR
DMPGEDGTSGLSENLSLGEISPAHCWHAGQRAMQEGKRGAETFLKELAWREFAYHLMYHT
PRILDQNWREEWQAFPWNEDERCAEVLAWKQGRTGMPFVDAAMRELQVTGRMHNRGRMIV
ASYLTKHLMCHWRIGQKWFEEHLIDWDPANNAMGWQWAAGSGPDATPFFRIFNPETQLDR
FDKGRNYTRRWIAEGREKPSEDALEYFDAIPRRWGRRPDDDYPDPIVDLSEGRARALDAY
RNRDF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggggtcaagccaggagcaagaccccgaacgtgagtgaaaacgccccccttatc
gtatggttccgccgcgatctgcgactgagcgaccatcctgcattggcggcggcctgcaag
acgggccgcccggtgatcccgcttttcatccatgacaatcagtcagacgccttgggggcc
gcaccgaagtttcggctggggctggcgttggcctgtttgggggatacgctcaaggaaaag
ggcagccgtctgatcctgcggcgcggggatgcactggacgttctgcgcgatgtgatcgag
caaaccggggcaggggcggtttactggagccgtctttacgatcccgccgccatcgaccgc
gataccaaagtgaaggatgcgttgaaggaggatggggtcgaggcctgcagctttgccggt
cacctgatgtttgagccttggacggtcgagaccaaaacaggcggtttttacaaggttttc
accccttattggaaatccgtgcggggccgcgatgtggcggagcctttggcgacccctagt
gagattcgcgcgcccgaagactggcccgacagcgacgtgctggacgattggcagatggac
gccgagatgcagcgcgggcgtgatgttgtgcgcccctatgtccgattgggcgaggccgcc
gcgcaggcgcggctggggtccttcatcgcggatatcgtcgacggctatgatgagagccgc
gacatgccgggtgaagatggcacttctggactgtccgaaaacctgtcgttaggcgaaatc
agcccggcgcactgctggcatgcaggtcagcgggccatgcaagagggcaagcgcggggcc
gagacgttcttgaaagaactcgcgtggcgcgaatttgcgtaccacctgatgtaccacacg
ccgcgcatccttgaccagaactggcgcgaggaatggcaggctttcccatggaacgaagat
gagcggtgcgcggaagtgctggcatggaaacaggggcgcaccggcatgcctttcgttgat
gccgctatgcgcgaattgcaggtcacggggcggatgcacaaccggggccgcatgatcgtt
gcgagctatctgaccaagcacctcatgtgtcactggcggattggccaaaagtggttcgaa
gagcacctgatcgactgggacccggccaataacgcgatgggctggcagtgggcggcagga
tccggccctgatgcgacgccgttctttcggatttttaaccccgaaacccagctcgatcgc
tttgacaaggggcgcaactatacccgtcgctggatcgccgaggggcgtgagaaaccgagc
gaagacgcgcttgaatatttcgacgcgattccgcgtcgctggggccgccgcccggacgac
gactaccccgatccgattgtcgatctctcagaagggcgcgcacgggcgctggacgcctat
cgcaatcgtgatttttaa
DBGET
integrated database retrieval system
