Sulfitobacter indolifex: DSM14862_01637
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Entry
DSM14862_01637 CDS
T08028
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sinl
Sulfitobacter indolifex
Pathway
sinl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM14862_01637 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinl03019
]
DSM14862_01637 (rhlE_2)
Enzymes [BR:
sinl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSM14862_01637 (rhlE_2)
Messenger RNA biogenesis [BR:
sinl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSM14862_01637 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
HEM4
P-loop_SecA
Maf_flag10_N
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
UOA18856
LinkDB
All DBs
Position
cDSM14862:complement(1655878..1657194)
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AA seq
438 aa
AA seq
DB search
MSDFDMMGLPKKLVARLNEMGLKDPTPIQRQAIPQAMNGRDVMGLAQTGTGKTAAFGVPL
LAQMMELEGRPEPRSVRGLVLAPTRELAQQIAVNLRGYAEGTQIKVAMVVGGQSINTQIK
RLERGVDLLIATPGRLLDLLDRRAVKLDTTTFLVLDEADQMLDMGFIHDLRKISNLIPKE
RQTMLFSATMPKLMNEIANSYLNSPIRIEVSPPGKAADKVTQEVHFIAKAEKTELLKELL
AKHKGERALVFGRTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKGGDITVLV
ATDVAARGLDIPDVKHVYNFELPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAI
QKTMGISIPVASGRPWEVIDEPSKPKGRGRGRGGRPGGGGGRPGGGGGGGGEAAGKPSGG
RRRRRSGGGGKPGGQQAA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgacatgatgggcctgccaaagaaactggttgcccggttgaatgaaatg
ggtctgaaagatccaaccccgatccaacgccaagcgatcccccaagccatgaatggccgt
gacgtgatgggccttgcccagaccggcaccggtaaaacggcggcttttggtgtgccgctt
ctggcgcagatgatggagcttgaaggccgccccgagccgcgttcggtgcgtggtctggta
cttgccccaacccgcgaattggcgcagcagatcgccgtgaacctgcgcggctatgctgaa
ggcacgcagattaaagtggcgatggtcgtcggcggccagtcgatcaacacgcagatcaag
cgtctggaacgcggtgtcgatctattgatcgccacaccgggccgtctgctcgaccttctg
gatcgccgtgcggtcaaactcgacacgacgaccttcctcgtgctcgatgaggccgaccag
atgctcgacatgggctttatccatgacctgcgcaaaatctcgaacctgatcccgaaagag
cgtcagacgatgctgttttcggcgaccatgcccaagctgatgaatgagatcgccaacagc
tatctcaacagcccgatccgcatcgaagtctcgcctccgggcaaggcggcggacaaggtg
acccaagaggtgcacttcatcgccaaggccgagaagacagagctgctgaaggaactgctg
gctaagcacaagggcgagcgggcgctggtctttgggcgcaccaaacatggctcggaaaag
ctgatgaagacgctggtgaaagccgggtttgacgccgcttcgatccatggcaacaaaagc
caaggtcagcgtgaccgggcgattgcgggctttaagggcggtgacattaccgtgcttgtg
gccactgatgtggcggcccgtggtctggatatcccggatgtgaagcacgtctataacttc
gagctgcccaacgtgcccgacaactatgtgcaccggattggccggaccgcgcgggcgggc
aaagacggcgctgcagtggctttctgcgcaccggatgaaatgggcgagttgaaggcgatc
cagaagactatggggatttcgatccctgtcgcctcgggccgtccttgggaagtgattgat
gagccgtccaaacccaaaggccgtggccgtgggcgcggtggccgtcctggtggcggcggt
ggtcgtcccggtggcggaggcggtggcggtggcgaagctgctggcaagccaagcggcggt
cgccgtcggcggcgcagtggtggcggtggcaagccgggcggccagcaggcagcctaa
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